RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 PSPC1Q8WXF1 523 aaKnown RBP13.46□□□□□ -0.25
CNOT4-211ENST00000498534 FAM193BQ96PV7 902 aaPredicted RBP13.46□□□□□ -0.25
CNOT4-211ENST00000498534 ZBP1Q9H171 429 aa13.46□□□□□ -0.25
CNOT4-211ENST00000498534 POMKQ9H5K3 350 aa13.46□□□□□ -0.25
CNOT4-211ENST00000498534 NRDE2Q9H7Z3 1164 aa13.46□□□□□ -0.25
CNOT4-211ENST00000498534 DBR1Q9UK59 544 aaKnown RBP13.46□□□□□ -0.25
CNOT4-211ENST00000498534 KCNJ14Q9UNX9 436 aa13.46□□□□□ -0.25
CNOT4-211ENST00000498534 SORCS3Q9UPU3 1222 aa13.46□□□□□ -0.25
CNOT4-211ENST00000498534 MYO10Q9HD67 2058 aa13.46□□□□□ -0.26
CNOT4-211ENST00000498534 EML1O00423 815 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 SLC37A4O43826 429 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 CCNT1O60563 726 aaKnown RBP13.45□□□□□ -0.26
CNOT4-211ENST00000498534 BAG4O95429 457 aaKnown RBP13.45□□□□□ -0.26
CNOT4-211ENST00000498534 RFC5P40937 340 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 NPEPPSP55786 919 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 MTMR3Q13615 1198 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 NPY5RQ15761 445 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 CABP7Q86V35 215 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 C12orf76Q8N812 135 aaPredicted RBP13.45□□□□□ -0.26
CNOT4-211ENST00000498534 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 AUTS2Q8WXX7 1259 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 AIFM3Q96NN9 605 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 EMILIN2Q9BXX0 1053 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 IFT122Q9HBG6 1241 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 KCNMB3Q9NPA1 279 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 UBN1Q9NPG3 1134 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 AGPAT5Q9NUQ2 364 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 FAN1Q9Y2M0 1017 aa13.45□□□□□ -0.26
CNOT4-211ENST00000498534 C2CD4DB7Z1M9 353 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 TBX3O15119 743 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 GAS2O43903 313 aaKnown RBP13.44□□□□□ -0.26
CNOT4-211ENST00000498534 EPCAMP16422 314 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 KLRC2P26717 231 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 SLC11A1P49279 550 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 LAMTOR4Q0VGL1 99 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 EPHA7Q15375 998 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 KIAA1841Q6NSI8 718 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 MRPL10Q7Z7H8 261 aaKnown RBP13.44□□□□□ -0.26
CNOT4-211ENST00000498534 TMEM173Q86WV6 379 aaPredicted RBP13.44□□□□□ -0.26
CNOT4-211ENST00000498534 C4orf19Q8IY42 314 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 SLFN12Q8IYM2 578 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 ZDHHC14Q8IZN3 488 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 TDRD5Q8NAT2 981 aaKnown RBP13.44□□□□□ -0.26
CNOT4-211ENST00000498534 CNNM3Q8NE01 707 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 SLC22A17Q8WUG5 538 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 TMEM143Q96AN5 459 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 PHF20Q9BVI0 1012 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 DHX33Q9H6R0 707 aaKnown RBP13.44□□□□□ -0.26
CNOT4-211ENST00000498534 RSAD1Q9HA92 442 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 DNAJB4Q9UDY4 337 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 LIMD1Q9UGP4 676 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 CDH22Q9UJ99 828 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 VAV3Q9UKW4 847 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 USTQ9Y2C2 406 aa13.44□□□□□ -0.26
CNOT4-211ENST00000498534 CNTNAP2Q9UHC6 1331 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 MEIS3P2A8K0S8 358 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 WEE2P0C1S8 567 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 YWHABP31946 246 aaKnown RBP13.43□□□□□ -0.26
CNOT4-211ENST00000498534 VCPP55072 806 aaKnown RBP13.43□□□□□ -0.26
CNOT4-211ENST00000498534 TCF15Q12870 199 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 XKR9Q5GH70 373 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 AGMOQ6ZNB7 445 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 PIK3AP1Q6ZUJ8 805 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 ZNF280BQ86YH2 543 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 WASF1Q92558 559 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 ATOH1Q92858 354 aaPredicted RBP13.43□□□□□ -0.26
CNOT4-211ENST00000498534 ACSF2Q96CM8 615 aaPredicted RBP13.43□□□□□ -0.26
CNOT4-211ENST00000498534 TMEM175Q9BSA9 504 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 ZSWIM4Q9H7M6 989 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 MRPL17Q9NRX2 175 aaKnown RBP13.43□□□□□ -0.26
CNOT4-211ENST00000498534 BMP2KQ9NSY1 1161 aaPredicted RBP13.43□□□□□ -0.26
CNOT4-211ENST00000498534 SSX2IPQ9Y2D8 614 aa13.43□□□□□ -0.26
CNOT4-211ENST00000498534 NR1I2O75469 434 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 DDHD2O94830 711 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 ERLIN2O94905 339 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 BRD1O95696 1058 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 ITGA4P13612 1032 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 HOXA11P31270 313 aaPredicted RBP13.42□□□□□ -0.26
CNOT4-211ENST00000498534 TIE1P35590 1138 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 SCRN1Q12765 414 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 MXD4Q14582 209 aaPredicted RBP13.42□□□□□ -0.26
CNOT4-211ENST00000498534 PCBP1Q15365 356 aaKnown RBP eCLIP13.42□□□□□ -0.26
CNOT4-211ENST00000498534 PTPN14Q15678 1187 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 NCAPH2Q6IBW4 605 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 KANK3Q6NY19 840 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 ELMSAN1Q6PJG2 1045 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 TMC5Q6UXY8 1006 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 OTOP3Q7RTS5 596 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 FERMT3Q86UX7 667 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 TPH2Q8IWU9 490 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 RNF149Q8NC42 400 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 BCL7CQ8WUZ0 217 aaPredicted RBP13.42□□□□□ -0.26
CNOT4-211ENST00000498534 HAS1Q92839 578 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 KLHL5Q96PQ7 755 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 PHOX2BQ99453 314 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 LXNQ9BS40 222 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 MFSD1Q9H3U5 465 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 SFXN1Q9H9B4 322 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 RGL1Q9NZL6 768 aa13.42□□□□□ -0.26
CNOT4-211ENST00000498534 STK36Q9NRP7 1315 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms