RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 PKD2L1Q9P0L9 805 aa10.23□□□□□ -0.77
FAM3D-205ENST00000498347 UBIAD1Q9Y5Z9 338 aa10.23□□□□□ -0.77
FAM3D-205ENST00000498347 PATJQ8NI35 1801 aa10.23□□□□□ -0.77
FAM3D-205ENST00000498347 SPEGQ15772 3267 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 F5P12259 2224 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 MAN2B1O00754 1011 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 C2CD2LO14523 706 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 AXIN1O15169 862 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 TEX28O15482 410 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 ATG7O95352 703 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 VTNP04004 478 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 MYBP10242 640 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
FAM3D-205ENST00000498347 SPINK2P20155 84 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 SLC11A1P49279 550 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 NLRP11P59045 1033 aaKnown RBP10.22□□□□□ -0.77
FAM3D-205ENST00000498347 ACTR2P61160 394 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 USP17L6PQ6QN14 398 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 GLB1LQ6UWU2 654 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 CEP68Q76N32 757 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 METTL13Q8N6R0 699 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 LOXL4Q96JB6 756 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 LMAN1LQ9HAT1 526 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 RXFP1Q9HBX9 757 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 JADE2Q9NQC1 790 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 CHST12Q9NRB3 414 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 TBC1D13Q9NVG8 400 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 ZSWIM5Q9P217 1185 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 MAD2L2Q9UI95 211 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 FAN1Q9Y2M0 1017 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 TTC41PQ6P2S7 1318 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 COL1A2P08123 1366 aa10.22□□□□□ -0.77
FAM3D-205ENST00000498347 EVPLQ92817 2033 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 EIF4E1BA6NMX2 242 aaKnown RBP10.21□□□□□ -0.77
FAM3D-205ENST00000498347 CHURC1-FNTBB4DL54 471 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 PIK3CDO00329 1044 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 ZNF213O14771 459 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 SOD2P04179 222 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 URODP06132 367 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 SKIP12755 728 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 FNTBP49356 437 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 NOVA1P51513 510 aaKnown RBP10.21□□□□□ -0.77
FAM3D-205ENST00000498347 CCDC173Q0VFZ6 552 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 KLHL40Q2TBA0 621 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 MCMDC2Q4G0Z9 681 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 CASC1Q6TDU7 716 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 LONP2Q86WA8 852 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 PALB2Q86YC2 1186 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 TBC1D10CQ8IV04 446 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 UBE2Q2Q8WVN8 375 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 SDF4Q9BRK5 362 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 PHF20Q9BVI0 1012 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 SCNM1Q9BWG6 230 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 ARRDC1-AS1Q9H2J1 176 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 DNAJB4Q9UDY4 337 aa10.21□□□□□ -0.77
FAM3D-205ENST00000498347 IGKV6D-21A0A0A0MT36 114 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 MEIS2O14770 477 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 OFD1O75665 1012 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 ZMYM6O95789 1325 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 SRSF5Q13243 272 aaKnown RBP10.2□□□□□ -0.78
FAM3D-205ENST00000498347 HS1BP3Q53T59 392 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 TTC22Q5TAA0 569 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 FAM160B1Q5W0V3 765 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 LILRA6Q6PI73 481 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 PDZD3Q86UT5 571 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 ZNF280BQ86YH2 543 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 ZNF687Q8N1G0 1237 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 PI4K2BQ8TCG2 481 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 FGF13Q92913 245 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 FAM193BQ96PV7 902 aaPredicted RBP10.2□□□□□ -0.78
FAM3D-205ENST00000498347 PPP1R9BQ96SB3 815 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 TRAIPQ9BWF2 469 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 GBP3Q9H0R5 595 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 IGSF5Q9NSI5 407 aa10.2□□□□□ -0.78
FAM3D-205ENST00000498347 NDRG2Q9UN36 371 aaKnown RBP10.2□□□□□ -0.78
FAM3D-205ENST00000498347 ASXL3Q9C0F0 2248 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 BAZ2BQ9UIF8 2168 aaKnown RBP10.19□□□□□ -0.78
FAM3D-205ENST00000498347 LAMA4Q16363 1823 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 NFASCO94856 1347 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 SHISA7A6NL88 538 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 ESPNB1AK53 854 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 ZBTB42B2RXF5 422 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 BACH1O14867 736 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 GIPC1O14908 333 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 MAGEB2O15479 319 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 TGM5O43548 720 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 ZMYND10O75800 440 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 TOP3BO95985 862 aaKnown RBP10.19□□□□□ -0.78
FAM3D-205ENST00000498347 HSP90AA1P07900 732 aaKnown RBP10.19□□□□□ -0.78
FAM3D-205ENST00000498347 NCLP19338 710 aaKnown RBP10.19□□□□□ -0.78
FAM3D-205ENST00000498347 TMOD1P28289 359 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 PHKA2P46019 1235 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 ZNF445P59923 1031 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 ZNF252P-AS1Q0IIN9 211 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 SLC35G1Q2M3R5 365 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 IFIT1BQ5T764 474 aaKnown RBP10.19□□□□□ -0.78
FAM3D-205ENST00000498347 RNF43Q68DV7 783 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 TAS1R1Q7RTX1 841 aa10.19□□□□□ -0.78
FAM3D-205ENST00000498347 GRASPQ7Z6J2 395 aaPredicted RBP10.19□□□□□ -0.78
FAM3D-205ENST00000498347 PLEKHM2Q8IWE5 1019 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms