RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 SAFB2Q14151 953 aaKnown RBP eCLIP3.93□□□□□ -1.78
RIF1-212ENST00000498041 GRM7Q14831 915 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 PTPROQ16827 1216 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 HS1BP3Q53T59 392 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 TAS1R1Q7RTX1 841 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 POLNQ7Z5Q5 900 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 FUKQ8N0W3 1084 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 CNTD1Q8N815 330 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 PRPF38AQ8NAV1 312 aaKnown RBP3.93□□□□□ -1.78
RIF1-212ENST00000498041 PIK3C3Q8NEB9 887 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 TGFBRAP1Q8WUH2 860 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 PAWRQ96IZ0 340 aaKnown RBP3.93□□□□□ -1.78
RIF1-212ENST00000498041 GPHA2Q96T91 129 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 DEF6Q9H4E7 631 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 AGO3Q9H9G7 860 aaKnown RBP3.93□□□□□ -1.78
RIF1-212ENST00000498041 CD248Q9HCU0 757 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 PLA2G3Q9NZ20 509 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 DPP7Q9UHL4 492 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 ST6GALNAC2Q9UJ37 374 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 RCAN3Q9UKA8 241 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 EDARQ9UNE0 448 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 ALG1L2C9J202 215 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 ALDH1A2O94788 518 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 LTA4HP09960 611 aaKnown RBP3.92□□□□□ -1.78
RIF1-212ENST00000498041 C6P13671 934 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 COMTP21964 271 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 GPR3P46089 330 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 MEF2AQ02078 507 aaPredicted RBP3.92□□□□□ -1.78
RIF1-212ENST00000498041 KLF1Q13351 362 aaPredicted RBP3.92□□□□□ -1.78
RIF1-212ENST00000498041 KCNK18Q7Z418 384 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 ADGRE4PQ86SQ3 457 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 CMTM4Q8IZR5 234 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 SH3RF3Q8TEJ3 882 aaPredicted RBP3.92□□□□□ -1.78
RIF1-212ENST00000498041 AUTS2Q8WXX7 1259 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 MRIQ9BWK5 157 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 QRSL1Q9H0R6 528 aaKnown RBP3.92□□□□□ -1.78
RIF1-212ENST00000498041 IL23AQ9NPF7 189 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 ING3Q9NXR8 418 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 TCAF1Q9Y4C2 921 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 SCRIBQ14160 1630 aa3.92□□□□□ -1.78
RIF1-212ENST00000498041 UBE2QL1A1L167 161 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 NRP1O14786 923 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 ZNF20P17024 532 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 MSX2P35548 267 aaPredicted RBP3.91□□□□□ -1.78
RIF1-212ENST00000498041 GDF5P43026 501 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 SELENOPP49908 381 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 NPEPPSP55786 919 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 WNT3AP56704 352 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 CDK17Q00537 523 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 SRSF2Q01130 221 aaKnown RBP3.91□□□□□ -1.78
RIF1-212ENST00000498041 HHEXQ03014 270 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 FOXL1Q12952 345 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 UBE3CQ15386 1083 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 MUM1Q2TAK8 710 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 ANO4Q32M45 955 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 C19orf54Q5BKX5 351 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 TOR2AQ5JU69 321 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 ZNF585AQ6P3V2 769 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 FAM111BQ6SJ93 734 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 SPRED1Q7Z699 444 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 DVL3Q92997 716 aaPredicted RBP3.91□□□□□ -1.78
RIF1-212ENST00000498041 FATE1Q969F0 183 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 FAM89AQ96GI7 184 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 TMEM176AQ96HP8 235 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 WWC2-AS2Q96NR7 200 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 CDK5RAP1Q96SZ6 601 aaKnown RBP3.91□□□□□ -1.78
RIF1-212ENST00000498041 MPHOSPH9Q99550 1183 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 TCF25Q9BQ70 676 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 C1QTNF3Q9BXJ4 246 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 TRIM8Q9BZR9 551 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 KLC2Q9H0B6 622 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 IFT122Q9HBG6 1241 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 CCM2LQ9NUG4 571 aaPredicted RBP3.91□□□□□ -1.78
RIF1-212ENST00000498041 DNAJC28Q9NX36 388 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 NCDNQ9UBB6 729 aa3.91□□□□□ -1.78
RIF1-212ENST00000498041 NOP58Q9Y2X3 529 aaKnown RBP3.91□□□□□ -1.78
RIF1-212ENST00000498041 PRAMEF4O60810 478 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 TMEM127O75204 238 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 CFBP00751 764 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 NCLP19338 710 aaKnown RBP3.9□□□□□ -1.79
RIF1-212ENST00000498041 ACO1P21399 889 aaKnown RBP3.9□□□□□ -1.79
RIF1-212ENST00000498041 SLC5A3P53794 718 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 EVA1CP58658 441 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 DUSP2Q05923 314 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 ITKQ08881 620 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 MTMR1Q13613 665 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 FAM50AQ14320 339 aaKnown RBP3.9□□□□□ -1.79
RIF1-212ENST00000498041 INAVAQ3KP66 663 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 SYDE2Q5VT97 1194 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 MAMDC4Q6UXC1 1216 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 BTNL9Q6UXG8 535 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 Q6ZSN1 163 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 AMOTL1Q8IY63 956 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 D2HGDHQ8N465 521 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 MSL3Q8N5Y2 521 aaKnown RBP3.9□□□□□ -1.79
RIF1-212ENST00000498041 TSPEARQ8WU66 669 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 SNX33Q8WV41 574 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 EDAQ92838 391 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 ARL8AQ96BM9 186 aa3.9□□□□□ -1.79
RIF1-212ENST00000498041 GPATCH3Q96I76 525 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms