RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ZC3H12AQ5D1E8 599 aaKnown RBP6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 UBE2R2Q712K3 238 aaPredicted RBP6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 NLRC3Q7RTR2 1065 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 DYMQ7RTS9 669 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 TPH2Q8IWU9 490 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 DRC7Q8IY82 874 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 SCYL3Q8IZE3 742 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 COG1Q8WTW3 980 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 OPTNQ96CV9 577 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 CLIP3Q96DZ5 547 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 WRNIP1Q96S55 665 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 PTPN18Q99952 460 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 SLC13A1Q9BZW2 595 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 ATXN3LQ9H3M9 355 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 DNAJC18Q9H819 358 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 TRIM39Q9HCM9 518 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 LRP2BPQ9P2M1 347 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 STOML1Q9UBI4 398 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 PPP1R9AQ9ULJ8 1098 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 AP4E1Q9UPM8 1137 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 GIT1Q9Y2X7 761 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 TNPO3Q9Y5L0 923 aaKnown RBP6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 CSADQ9Y600 493 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 MYH6P13533 1939 aa6.84□□□□□ -1.32
TMEM39A-212ENST00000497993 ROBO3Q96MS0 1386 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 A0A0G2JLL6 359 aaPredicted RBP6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 NEMP1O14524 444 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 TNFRSF10CO14798 259 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 DYRK3O43781 588 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 APPP05067 770 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 ACRP10323 421 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 CETPP11597 493 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 BPIP17213 487 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 ADD2P35612 726 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 IGFALSP35858 605 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 ASPAP45381 313 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 GJA9P57773 515 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 ERVK-24P63145 666 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 GABPAQ06546 454 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 FAPQ12884 760 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 GRB10Q13322 594 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 SNAPC2Q13487 334 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 KCTD2Q14681 263 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 SLC9A5Q14940 896 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 PKN2Q16513 984 aaKnown RBP6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 YOD1Q5VVQ6 348 aaPredicted RBP6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 OVOS1Q6IE37 1185 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 PRRT2Q7Z6L0 340 aaPredicted RBP6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 ANKRD23Q86SG2 305 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 ZFPM1Q8IX07 1006 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 C1orf131Q8NDD1 294 aaKnown RBP6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 BRI3BPQ8WY22 251 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 EZH1Q92800 747 aaPredicted RBP6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 ATG4CQ96DT6 458 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 TNIP3Q96KP6 325 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 FAM83CQ9BQN1 747 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 IL1RAPL2Q9NP60 686 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 RAI14Q9P0K7 980 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 PI4KBQ9UBF8 816 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 SUCOQ9UBS9 1254 aaKnown RBP6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 NDOR1Q9UHB4 597 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 ZNF214Q9UL59 606 aaPredicted RBP6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 FZD1Q9UP38 647 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 ACTL7BQ9Y614 415 aa6.83□□□□□ -1.32
TMEM39A-212ENST00000497993 TNRC18O15417 2968 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 FRMPD2Q68DX3 1309 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 ANKRD34BA5PLL1 514 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 B4E1Z4 1266 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 PF4V1P10720 104 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 PABPC1P11940 636 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 PDE6AP16499 860 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 VCAM1P19320 739 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 MAP4P27816 1152 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 CAP2P40123 477 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 SARSP49591 514 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 SCNN1BP51168 640 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 GABREP78334 506 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 BIRC3Q13489 604 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 SART3Q15020 963 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 SEPT7Q16181 437 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 ARHGAP29Q52LW3 1261 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 TMEM240Q5SV17 173 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 GPR158Q5T848 1215 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 IQSEC1Q6DN90 963 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 OTUD7BQ6GQQ9 843 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 TATDN1Q6P1N9 297 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 C1orf228Q6PIY5 440 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 NSMFQ6X4W1 530 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 BEND4Q6ZU67 534 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 BRAPQ7Z569 592 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 CTU1Q7Z7A3 348 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 FOXP4Q8IVH2 680 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 TEX11Q8IYF3 940 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 VPS37AQ8NEZ2 397 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 SH3RF3Q8TEJ3 882 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 GCC1Q96CN9 775 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 FANCD2OSQ96PS1 177 aa6.82□□□□□ -1.32
TMEM39A-212ENST00000497993 KCNF1Q9H3M0 494 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms