RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 MYH11P35749 1972 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 ADGRA3Q8IWK6 1321 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 SPTLC2O15270 562 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 PPP6R2O75170 966 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 DGKIO75912 1065 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 STAG3L1P0CL83 205 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 ZSCAN20P17040 1043 aaPredicted RBP12.45□□□□□ -0.42
ERCC8-208ENST00000497892 PLCG1P19174 1290 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 SLC12A3P55017 1021 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 MBTD1Q05BQ5 628 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 KARSQ15046 597 aaKnown RBP12.45□□□□□ -0.42
ERCC8-208ENST00000497892 PCBP1Q15365 356 aaKnown RBP eCLIP12.45□□□□□ -0.42
ERCC8-208ENST00000497892 CDCA2Q69YH5 1023 aaPredicted RBP12.45□□□□□ -0.42
ERCC8-208ENST00000497892 ATL3Q6DD88 541 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 USP49Q70CQ1 688 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 CATSPER4Q7RTX7 472 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 SYT2Q8N9I0 419 aaPredicted RBP12.45□□□□□ -0.42
ERCC8-208ENST00000497892 LRRC15Q8TF66 581 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 BSNDQ8WZ55 320 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
ERCC8-208ENST00000497892 KIFAP3Q92845 792 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 CLIC6Q96NY7 704 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 RUSC1Q9BVN2 902 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 TRAIPQ9BWF2 469 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 DACT1Q9NYF0 836 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 KCND2Q9NZV8 630 aa12.45□□□□□ -0.42
ERCC8-208ENST00000497892 TFIP11Q9UBB9 837 aaKnown RBP12.45□□□□□ -0.42
ERCC8-208ENST00000497892 PIN4Q9Y237 131 aaKnown RBP12.45□□□□□ -0.42
ERCC8-208ENST00000497892 LINC01553A4QN01 128 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 LRRIQ4A6NIV6 560 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 ERLIN2O94905 339 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 PLA2G4BP0C869 781 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 GUCY2CP25092 1073 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 TXLNAP40222 546 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 NAMPTP43490 491 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 FAM189BP81408 668 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 MAPK7Q13164 816 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 GRIN2CQ14957 1233 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 PPP2R5AQ15172 486 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 FOXD4L6Q3SYB3 417 aaPredicted RBP12.44□□□□□ -0.42
ERCC8-208ENST00000497892 SPECC1Q5M775 1068 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 RINT1Q6NUQ1 792 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 FOXD4L3Q6VB84 417 aaPredicted RBP12.44□□□□□ -0.42
ERCC8-208ENST00000497892 C1orf186Q6ZWK4 172 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 DAW1Q8N136 415 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 RASSF8Q8NHQ8 419 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 ZNF689Q96CS4 500 aaPredicted RBP12.44□□□□□ -0.42
ERCC8-208ENST00000497892 EPSTI1Q96J88 318 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 TIPINQ9BVW5 301 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 ELAC1Q9H777 363 aaKnown RBP12.44□□□□□ -0.42
ERCC8-208ENST00000497892 BLOC1S4Q9NUP1 217 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 TMEM161AQ9NX61 479 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 DAXXQ9UER7 740 aaPredicted RBP12.44□□□□□ -0.42
ERCC8-208ENST00000497892 MYO9BQ13459 2157 aa12.44□□□□□ -0.42
ERCC8-208ENST00000497892 A0A0U1RQF3 1178 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 INO80B-WBP1J3KQ70 363 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 TSPAN1O60635 241 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 HIP1RO75146 1068 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 SSBP05455 408 aaKnown RBP eCLIP12.43□□□□□ -0.42
ERCC8-208ENST00000497892 HOXA11P31270 313 aaPredicted RBP12.43□□□□□ -0.42
ERCC8-208ENST00000497892 DDIT3P35638 169 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 DNM1Q05193 864 aaKnown RBP12.43□□□□□ -0.42
ERCC8-208ENST00000497892 AMHR2Q16671 573 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 TWF2Q6IBS0 349 aaKnown RBP12.43□□□□□ -0.42
ERCC8-208ENST00000497892 SPRED2Q7Z698 418 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 CMTR2Q8IYT2 770 aaKnown RBP12.43□□□□□ -0.42
ERCC8-208ENST00000497892 KCNG4Q8TDN1 519 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 RAD54LQ92698 747 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 DRC1Q96MC2 740 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 CDX2Q99626 313 aaPredicted RBP12.43□□□□□ -0.42
ERCC8-208ENST00000497892 C2orf40Q9H1Z8 148 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 STK17AQ9UEE5 414 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 TSR3Q9UJK0 312 aaKnown RBP12.43□□□□□ -0.42
ERCC8-208ENST00000497892 CFAP45Q9UL16 551 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 LRFN2Q9ULH4 789 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 PCDHB7Q9Y5E2 793 aa12.43□□□□□ -0.42
ERCC8-208ENST00000497892 CUTAO60888 179 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 ATF7P17544 494 aaPredicted RBP12.42□□□□□ -0.42
ERCC8-208ENST00000497892 RAB27AP51159 221 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 ERVK-21P61565 698 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 ZNF598Q86UK7 904 aaKnown RBP12.42□□□□□ -0.42
ERCC8-208ENST00000497892 ECHDC2Q86YB7 292 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 ZBTB8OSQ8IWT0 167 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 LARP4BQ92615 738 aaKnown RBP12.42□□□□□ -0.42
ERCC8-208ENST00000497892 CCDC51Q96ER9 411 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 IFT74Q96LB3 600 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 PRIMPOLQ96LW4 560 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 TGS1Q96RS0 853 aaKnown RBP12.42□□□□□ -0.42
ERCC8-208ENST00000497892 CCDC113Q9H0I3 377 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 PRDM12Q9H4Q4 367 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 C17orf75Q9HAS0 396 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 FAM105AQ9NUU6 356 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 CCDC39Q9UFE4 941 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 TCHHQ07283 1943 aa12.42□□□□□ -0.42
ERCC8-208ENST00000497892 CNTNAP2Q9UHC6 1331 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 B4GALT5O43286 388 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 HOXA2O43364 376 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 EOMESO95936 686 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 LINC00271P0C7V0 271 aa12.41□□□□□ -0.42
ERCC8-208ENST00000497892 FGFR1P11362 822 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms