RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 RINT1Q6NUQ1 792 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 C1orf186Q6ZWK4 172 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 KCNK18Q7Z418 384 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 ECHDC2Q86YB7 292 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 FIBCD1Q8N539 461 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 KCNG4Q8TDN1 519 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 CCDC51Q96ER9 411 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 MINDY3Q9H8M7 445 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 RC3H2Q9HBD1 1191 aaKnown RBP12.68□□□□□ -0.38
HLA-B-254ENST00000497377 GPRC5CQ9NQ84 441 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 STK17AQ9UEE5 414 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 ATP6V1DQ9Y5K8 247 aa12.68□□□□□ -0.38
HLA-B-254ENST00000497377 PHLPP2Q6ZVD8 1323 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 ZNF623O75123 536 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 BRD1O95696 1058 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 PLA2G4BP0C869 781 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 PLCG1P19174 1290 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 MBTD1Q05BQ5 628 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 PKP1Q13835 747 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 BTG3Q14201 252 aaPredicted RBP12.67□□□□□ -0.38
HLA-B-254ENST00000497377 FAM187BQ17R55 369 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 FOXD4L5Q5VV16 416 aaPredicted RBP12.67□□□□□ -0.38
HLA-B-254ENST00000497377 NOTUMQ6P988 496 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 DEPTORQ8TB45 409 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 FOXD4L4Q8WXT5 416 aaPredicted RBP12.67□□□□□ -0.38
HLA-B-254ENST00000497377 SYMPKQ92797 1274 aaKnown RBP12.67□□□□□ -0.38
HLA-B-254ENST00000497377 PRIMPOLQ96LW4 560 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 PLIN2Q99541 437 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 PRDM12Q9H4Q4 367 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 PRMT7Q9NVM4 692 aaPredicted RBP12.67□□□□□ -0.38
HLA-B-254ENST00000497377 TFIP11Q9UBB9 837 aaKnown RBP12.67□□□□□ -0.38
HLA-B-254ENST00000497377 TRANK1O15050 2925 aa12.67□□□□□ -0.38
HLA-B-254ENST00000497377 FNDC1Q4ZHG4 1894 aaPredicted RBP12.66□□□□□ -0.38
HLA-B-254ENST00000497377 NLRC5Q86WI3 1866 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 RBAK-RBAKDNI3L0D1 243 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 TSPAN1O60635 241 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 HIP1RO75146 1068 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 ARHGEF15O94989 841 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 SSBP05455 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
HLA-B-254ENST00000497377 HOXA11P31270 313 aaPredicted RBP12.66□□□□□ -0.38
HLA-B-254ENST00000497377 DMP1Q13316 513 aaPredicted RBP12.66□□□□□ -0.38
HLA-B-254ENST00000497377 KARSQ15046 597 aaKnown RBP12.66□□□□□ -0.38
HLA-B-254ENST00000497377 MAPK6Q16659 721 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 CCDC73Q6ZRK6 1079 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 ABI1Q8IZP0 508 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 CNNM3Q8NE01 707 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 MYLIPQ8WY64 445 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 ARNTL2Q8WYA1 636 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 RAD54LQ92698 747 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 CLP1Q92989 425 aaKnown RBP12.66□□□□□ -0.38
HLA-B-254ENST00000497377 PGBD4Q96DM1 585 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 EPSTI1Q96J88 318 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 CLIC6Q96NY7 704 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 RUSC1Q9BVN2 902 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 TMEM117Q9H0C3 514 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 FAM105AQ9NUU6 356 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 ODF2LQ9ULJ1 636 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 RBM19Q9Y4C8 960 aaKnown RBP12.66□□□□□ -0.38
HLA-B-254ENST00000497377 MYH11P35749 1972 aa12.66□□□□□ -0.38
HLA-B-254ENST00000497377 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
HLA-B-254ENST00000497377 CUTAO60888 179 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 RB1P06400 928 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 FOSL2P15408 326 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 POU3F3P20264 500 aaPredicted RBP12.65□□□□□ -0.38
HLA-B-254ENST00000497377 SCP2P22307 547 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 DDIT3P35638 169 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 MAPK7Q13164 816 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 AMHR2Q16671 573 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 SPECC1Q5M775 1068 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 RRAGBQ5VZM2 374 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 ZNF598Q86UK7 904 aaKnown RBP12.65□□□□□ -0.38
HLA-B-254ENST00000497377 TMEM192Q8IY95 271 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 DAW1Q8N136 415 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 BSNDQ8WZ55 320 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 LARP4BQ92615 738 aaKnown RBP12.65□□□□□ -0.38
HLA-B-254ENST00000497377 NTPCRQ9BSD7 190 aaKnown RBP12.65□□□□□ -0.38
HLA-B-254ENST00000497377 PLVAPQ9BX97 442 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 FZD8Q9H461 694 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 BLOC1S4Q9NUP1 217 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 LMCD1Q9NZU5 365 aa12.65□□□□□ -0.38
HLA-B-254ENST00000497377 CNTNAP2Q9UHC6 1331 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 CDH23Q9H251 3354 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 CARNS1A5YM72 827 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 TBKBP1A7MCY6 615 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 C5orf67F2Z3F1 127 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 H0YCG3 227 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 ACKR2O00590 384 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 FGFR1P11362 822 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 PLS3P13797 630 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 ATF7P17544 494 aaPredicted RBP12.64□□□□□ -0.39
HLA-B-254ENST00000497377 ARF4P18085 180 aaPredicted RBP12.64□□□□□ -0.39
HLA-B-254ENST00000497377 IBSPP21815 317 aaPredicted RBP12.64□□□□□ -0.39
HLA-B-254ENST00000497377 BMPR1AP36894 532 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 SMTNP53814 917 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 PEX3P56589 373 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 NUCB2P80303 420 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 DNM1Q05193 864 aaKnown RBP12.64□□□□□ -0.39
HLA-B-254ENST00000497377 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 EPC2Q52LR7 807 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 NAALADL2Q58DX5 795 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms