RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 RBM25P49756 843 aaKnown RBP6.52□□□□□ -1.37
GGPS1-208ENST00000497327 BMP2KLQ5H9B9 411 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 SLC10A5Q5PT55 438 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 EEPD1Q7L9B9 569 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 ATG9AQ7Z3C6 839 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 TTLL11Q8NHH1 800 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 KLHDC4Q8TBB5 520 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 KIF1BPQ96EK5 621 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.52□□□□□ -1.37
GGPS1-208ENST00000497327 TINF2Q9BSI4 451 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 UTP14AQ9BVJ6 771 aaKnown RBP6.52□□□□□ -1.37
GGPS1-208ENST00000497327 EPN3Q9H201 632 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 SMOC1Q9H4F8 434 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 PPARGC1AQ9UBK2 798 aaKnown RBP6.52□□□□□ -1.37
GGPS1-208ENST00000497327 ASH2LQ9UBL3 628 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 SRP68Q9UHB9 627 aaKnown RBP6.52□□□□□ -1.37
GGPS1-208ENST00000497327 TRMT112Q9UI30 125 aaKnown RBP6.52□□□□□ -1.37
GGPS1-208ENST00000497327 ST6GALNAC2Q9UJ37 374 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 SH3TC1Q8TE82 1336 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 USP42Q9H9J4 1324 aaKnown RBP6.51□□□□□ -1.37
GGPS1-208ENST00000497327 PDE8AO60658 829 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 DGKIO75912 1065 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 CIAO1O76071 339 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 GSPT1P15170 499 aaKnown RBP6.51□□□□□ -1.37
GGPS1-208ENST00000497327 PDE1AP54750 535 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 ZXDAP98168 799 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 CDSNQ15517 529 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 TTC22Q5TAA0 569 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 TBC1D9BQ66K14 1250 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 MCF2L2Q86YR7 1114 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 ERC1Q8IUD2 1116 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 CELF2-AS1Q8N7Q2 184 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 PHOSPHO1Q8TCT1 267 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 CLIC6Q96NY7 704 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 CAMKK2Q96RR4 588 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 TMEM209Q96SK2 561 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 IL1RAPL2Q9NP60 686 aa6.51□□□□□ -1.37
GGPS1-208ENST00000497327 NIP7Q9Y221 180 aaKnown RBP eCLIP6.51□□□□□ -1.37
GGPS1-208ENST00000497327 ZNF536O15090 1300 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 AOX1Q06278 1338 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 C4BP0C0L5 1744 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 RTL9Q8NET4 1388 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 EYA2O00167 538 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 DLX3O60479 287 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 CYP1A1P04798 512 aaPredicted RBP6.5□□□□□ -1.37
GGPS1-208ENST00000497327 MX1P20591 662 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 EPHB4P54760 987 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 G3BP1Q13283 466 aaKnown RBP eCLIP6.5□□□□□ -1.37
GGPS1-208ENST00000497327 CYP4F22Q6NT55 531 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 GLB1LQ6UWU2 654 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 TMC5Q6UXY8 1006 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 IGDCC4Q8TDY8 1250 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 DVL3Q92997 716 aaPredicted RBP6.5□□□□□ -1.37
GGPS1-208ENST00000497327 EAF2Q96CJ1 260 aaPredicted RBP6.5□□□□□ -1.37
GGPS1-208ENST00000497327 IER2Q9BTL4 223 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 JAM3Q9BX67 310 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 TMEM168Q9H0V1 697 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 L2HGDHQ9H9P8 463 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 GPR27Q9NS67 375 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 CROTQ9UKG9 612 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 NUP98P52948 1817 aa6.5□□□□□ -1.37
GGPS1-208ENST00000497327 TAF1LQ8IZX4 1826 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 GPR42O15529 346 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 AKAP8O43823 692 aaKnown RBP6.49□□□□□ -1.37
GGPS1-208ENST00000497327 GYS1P13807 737 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 TM4SF1P30408 202 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 RFC4P35249 363 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 IL15P40933 162 aaPredicted RBP6.49□□□□□ -1.37
GGPS1-208ENST00000497327 TFCP2Q12800 502 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 ICAM4Q14773 271 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 SF3B3Q15393 1217 aaKnown RBP6.49□□□□□ -1.37
GGPS1-208ENST00000497327 SURF1Q15526 300 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 LRRC24Q50LG9 513 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 PLEKHH3Q7Z736 793 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 CLASRPQ8N2M8 674 aaKnown RBP6.49□□□□□ -1.37
GGPS1-208ENST00000497327 DNERQ8NFT8 737 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 PIP4K2CQ8TBX8 421 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 HNRNPLLQ8WVV9 542 aaKnown RBP6.49□□□□□ -1.37
GGPS1-208ENST00000497327 KCTD13Q8WZ19 329 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 PUS3Q9BZE2 481 aaKnown RBP6.49□□□□□ -1.37
GGPS1-208ENST00000497327 SIL1Q9H173 461 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 GREM2Q9H772 168 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 CD248Q9HCU0 757 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 SLC6A20Q9NP91 592 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 GPR108Q9NPR9 543 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 RIPOR2Q9Y4F9 1068 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 BCORQ6W2J9 1755 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 TTC41PQ6P2S7 1318 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 SCN7AQ01118 1682 aa6.49□□□□□ -1.37
GGPS1-208ENST00000497327 AFDNP55196 1824 aaKnown RBP6.48□□□□□ -1.37
GGPS1-208ENST00000497327 ABCC12Q96J65 1359 aa6.48□□□□□ -1.37
GGPS1-208ENST00000497327 ANKRD18BA2A2Z9 1011 aa6.48□□□□□ -1.37
GGPS1-208ENST00000497327 HSP90B1P14625 803 aaKnown RBP6.48□□□□□ -1.37
GGPS1-208ENST00000497327 SDSP20132 328 aa6.48□□□□□ -1.37
GGPS1-208ENST00000497327 IFIT5Q13325 482 aaKnown RBP6.48□□□□□ -1.37
GGPS1-208ENST00000497327 OS9Q13438 667 aaPredicted RBP6.48□□□□□ -1.37
GGPS1-208ENST00000497327 CCDC57Q2TAC2 916 aa6.48□□□□□ -1.37
GGPS1-208ENST00000497327 COL23A1Q86Y22 540 aaPredicted RBP6.48□□□□□ -1.37
GGPS1-208ENST00000497327 DTX3Q8N9I9 347 aa6.48□□□□□ -1.37
GGPS1-208ENST00000497327 CHST13Q8NET6 341 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms