RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 MBTD1Q05BQ5 628 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 MXD4Q14582 209 aaPredicted RBP16.78■□□□□ 0.28
NEK4-206ENST00000496822 TMEM31Q5JXX7 168 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 TTC38Q5R3I4 469 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 LLGL2Q6P1M3 1020 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 POTEGQ6S5H5 508 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 TMC7Q7Z402 723 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 MRPL10Q7Z7H8 261 aaKnown RBP16.78■□□□□ 0.28
NEK4-206ENST00000496822 ZNF280BQ86YH2 543 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 IFNLR1Q8IU57 520 aaPredicted RBP16.78■□□□□ 0.28
NEK4-206ENST00000496822 NOSTRINQ8IVI9 506 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 SMG8Q8ND04 991 aaKnown RBP16.78■□□□□ 0.28
NEK4-206ENST00000496822 PGBD4Q96DM1 585 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 CCDC43Q96MW1 224 aaKnown RBP16.78■□□□□ 0.28
NEK4-206ENST00000496822 GBP3Q9H0R5 595 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 RSAD1Q9HA92 442 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 NGRNQ9NPE2 291 aaKnown RBP16.78■□□□□ 0.28
NEK4-206ENST00000496822 GPRC5CQ9NQ84 441 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 C2orf71A6NGG8 1288 aa16.77■□□□□ 0.28
NEK4-206ENST00000496822 INO80B-WBP1J3KQ70 363 aa16.77■□□□□ 0.28
NEK4-206ENST00000496822 GALTP07902 379 aa16.77■□□□□ 0.28
NEK4-206ENST00000496822 SLC11A1P49279 550 aa16.77■□□□□ 0.28
NEK4-206ENST00000496822 RNASELQ05823 741 aaKnown RBP16.77■□□□□ 0.28
NEK4-206ENST00000496822 TFDP1Q14186 410 aa16.77■□□□□ 0.28
NEK4-206ENST00000496822 MAEAQ7L5Y9 396 aa16.77■□□□□ 0.28
NEK4-206ENST00000496822 AUTS2Q8WXX7 1259 aa16.77■□□□□ 0.28
NEK4-206ENST00000496822 TMEM169Q96HH4 297 aa16.77■□□□□ 0.28
NEK4-206ENST00000496822 VN1R3Q9BXE9 311 aa16.77■□□□□ 0.28
NEK4-206ENST00000496822 TUFT1Q9NNX1 390 aa16.77■□□□□ 0.28
NEK4-206ENST00000496822 B4GALT5O43286 388 aa16.76■□□□□ 0.27
NEK4-206ENST00000496822 DDHD2O94830 711 aa16.76■□□□□ 0.27
NEK4-206ENST00000496822 CD2BP2O95400 341 aaKnown RBP16.76■□□□□ 0.27
NEK4-206ENST00000496822 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
NEK4-206ENST00000496822 ORC2Q13416 577 aaPredicted RBP16.76■□□□□ 0.27
NEK4-206ENST00000496822 GNL2Q13823 731 aaKnown RBP16.76■□□□□ 0.27
NEK4-206ENST00000496822 SMC1AQ14683 1233 aaKnown RBP16.76■□□□□ 0.27
NEK4-206ENST00000496822 C4orf32Q8N8J7 132 aa16.76■□□□□ 0.27
NEK4-206ENST00000496822 MRPL43Q8N983 215 aaKnown RBP16.76■□□□□ 0.27
NEK4-206ENST00000496822 RSPH1Q8WYR4 309 aa16.76■□□□□ 0.27
NEK4-206ENST00000496822 IGSF21Q96ID5 467 aa16.76■□□□□ 0.27
NEK4-206ENST00000496822 POP1Q99575 1024 aaKnown RBP16.76■□□□□ 0.27
NEK4-206ENST00000496822 POLR3CQ9BUI4 534 aaPredicted RBP16.76■□□□□ 0.27
NEK4-206ENST00000496822 APOL5Q9BWW9 433 aa16.76■□□□□ 0.27
NEK4-206ENST00000496822 ZBP1Q9H171 429 aa16.76■□□□□ 0.27
NEK4-206ENST00000496822 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
NEK4-206ENST00000496822 HES2Q9Y543 173 aa16.76■□□□□ 0.27
NEK4-206ENST00000496822 IPPQ9Y573 584 aa16.76■□□□□ 0.27
NEK4-206ENST00000496822 CNTNAP2Q9UHC6 1331 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 DCXO43602 365 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 GPR37L1O60883 481 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 XRCC6P12956 609 aaKnown RBP eCLIP16.75■□□□□ 0.27
NEK4-206ENST00000496822 ARF4P18085 180 aaPredicted RBP16.75■□□□□ 0.27
NEK4-206ENST00000496822 CA8P35219 290 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 POU5F1BQ06416 359 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 RABEP1Q15276 862 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 ECM1Q16610 540 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 ANKRD54Q6NXT1 300 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 NOTUMQ6P988 496 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 SYCE2Q6PIF2 218 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 TMEM184AQ6ZMB5 413 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 CDR2LQ86X02 465 aaPredicted RBP16.75■□□□□ 0.27
NEK4-206ENST00000496822 VPS52Q8N1B4 723 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 URGCPQ8TCY9 931 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 SUSD6Q92537 303 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 NFKBIZQ9BYH8 718 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 S1PR5Q9H228 398 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 CDH22Q9UJ99 828 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 DBR1Q9UK59 544 aaKnown RBP16.75■□□□□ 0.27
NEK4-206ENST00000496822 HCFC2Q9Y5Z7 792 aa16.75■□□□□ 0.27
NEK4-206ENST00000496822 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.74■□□□□ 0.27
NEK4-206ENST00000496822 LRRIQ4A6NIV6 560 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 CLASP2O75122 1294 aaKnown RBP16.74■□□□□ 0.27
NEK4-206ENST00000496822 POMCP01189 267 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 ITGA4P13612 1032 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 U2AF2P26368 475 aaKnown RBP eCLIP16.74■□□□□ 0.27
NEK4-206ENST00000496822 RPA1P27694 616 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 AXLP30530 894 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 MLH1P40692 756 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 TRAPPC10P48553 1259 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 TOB1P50616 345 aaPredicted RBP16.74■□□□□ 0.27
NEK4-206ENST00000496822 PCBP1Q15365 356 aaKnown RBP eCLIP16.74■□□□□ 0.27
NEK4-206ENST00000496822 DDX53Q86TM3 631 aaKnown RBP16.74■□□□□ 0.27
NEK4-206ENST00000496822 BSNDQ8WZ55 320 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 CCDC51Q96ER9 411 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 CSRNP2Q9H175 543 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 NXF3Q9H4D5 531 aaKnown RBP16.74■□□□□ 0.27
NEK4-206ENST00000496822 MUTYHQ9UIF7 546 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 NOL7Q9UMY1 257 aaKnown RBP16.74■□□□□ 0.27
NEK4-206ENST00000496822 PCDHB6Q9Y5E3 794 aa16.74■□□□□ 0.27
NEK4-206ENST00000496822 CXCL14O95715 111 aa16.73■□□□□ 0.27
NEK4-206ENST00000496822 SRGAP2BP0DMP2 458 aa16.73■□□□□ 0.27
NEK4-206ENST00000496822 CTSAP10619 480 aa16.73■□□□□ 0.27
NEK4-206ENST00000496822 ALADP13716 330 aa16.73■□□□□ 0.27
NEK4-206ENST00000496822 FXR2P51116 673 aaKnown RBP eCLIP16.73■□□□□ 0.27
NEK4-206ENST00000496822 RNF135Q8IUD6 432 aa16.73■□□□□ 0.27
NEK4-206ENST00000496822 MCPH1Q8NEM0 835 aa16.73■□□□□ 0.27
NEK4-206ENST00000496822 ERMNQ8TAM6 284 aa16.73■□□□□ 0.27
NEK4-206ENST00000496822 ZFP42Q96MM3 310 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms