RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 POLD4Q9HCU8 107 aa21.68■■□□□ 1.06
COL20A1-208ENST00000496810 HES2Q9Y543 173 aa21.68■■□□□ 1.06
COL20A1-208ENST00000496810 XRCC6P12956 609 aaKnown RBP eCLIP21.67■■□□□ 1.06
COL20A1-208ENST00000496810 ARF4P18085 180 aaPredicted RBP21.67■■□□□ 1.06
COL20A1-208ENST00000496810 PPM1AP35813 382 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 CCT6AP40227 531 aaKnown RBP21.67■■□□□ 1.06
COL20A1-208ENST00000496810 NDUFV1P49821 464 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 TFDP1Q14186 410 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 PADI6Q6TGC4 694 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 MRPL10Q7Z7H8 261 aaKnown RBP21.67■■□□□ 1.06
COL20A1-208ENST00000496810 ZNF280BQ86YH2 543 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 MSLNLQ96KJ4 702 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 NACC1Q96RE7 527 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 GBP3Q9H0R5 595 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 RNF39Q9H2S5 420 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 TLE6Q9H808 572 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 ENTPD7Q9NQZ7 604 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.67■■□□□ 1.06
COL20A1-208ENST00000496810 SPG21Q9NZD8 308 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 LZTS1Q9Y250 596 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 IPPQ9Y573 584 aa21.67■■□□□ 1.06
COL20A1-208ENST00000496810 LRRIQ4A6NIV6 560 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 TTLL13PA6NNM8 815 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 MBTPS2O43462 519 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 NCK2O43639 380 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 EDN1P05305 212 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 SKIP12755 728 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 CDC25AP30304 524 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 DUSP6Q16828 381 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 IGSF22Q8N9C0 903 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 ERMNQ8TAM6 284 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 VN1R3Q9BXE9 311 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 NXF3Q9H4D5 531 aaKnown RBP21.66■■□□□ 1.06
COL20A1-208ENST00000496810 RSAD1Q9HA92 442 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 LRWD1Q9UFC0 647 aa21.66■■□□□ 1.06
COL20A1-208ENST00000496810 DDHD2O94830 711 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 SLC11A1P49279 550 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 ZP2Q05996 745 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 HAUS3Q68CZ6 603 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 SNX29Q8TEQ0 813 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 PPP2R3CQ969Q6 453 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 KIFC3Q9BVG8 833 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 NFKBIZQ9BYH8 718 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 EPHX3Q9H6B9 360 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 CD207Q9UJ71 328 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 USP20Q9Y2K6 914 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 MYH11P35749 1972 aa21.65■■□□□ 1.06
COL20A1-208ENST00000496810 ARHGEF35A5YM69 484 aa21.64■■□□□ 1.05
COL20A1-208ENST00000496810 POMCP01189 267 aa21.64■■□□□ 1.05
COL20A1-208ENST00000496810 NCLP19338 710 aaKnown RBP21.64■■□□□ 1.05
COL20A1-208ENST00000496810 POU5F1BQ06416 359 aa21.64■■□□□ 1.05
COL20A1-208ENST00000496810 SMAD4Q13485 552 aaKnown RBP21.64■■□□□ 1.05
COL20A1-208ENST00000496810 CDCA2Q69YH5 1023 aaPredicted RBP21.64■■□□□ 1.05
COL20A1-208ENST00000496810 NOTUMQ6P988 496 aa21.64■■□□□ 1.05
COL20A1-208ENST00000496810 MCPH1Q8NEM0 835 aa21.64■■□□□ 1.05
COL20A1-208ENST00000496810 AUTS2Q8WXX7 1259 aa21.64■■□□□ 1.05
COL20A1-208ENST00000496810 MMTAG2Q9BU76 263 aaKnown RBP21.64■■□□□ 1.05
COL20A1-208ENST00000496810 APOL6Q9BWW8 343 aa21.64■■□□□ 1.05
COL20A1-208ENST00000496810 BHMT2Q9H2M3 363 aa21.64■■□□□ 1.05
COL20A1-208ENST00000496810 DDX19AQ9NUU7 478 aaKnown RBP21.64■■□□□ 1.05
COL20A1-208ENST00000496810 KIAA1024Q9UPX6 916 aa21.64■■□□□ 1.05
COL20A1-208ENST00000496810 KIF3AQ9Y496 699 aa21.64■■□□□ 1.05
COL20A1-208ENST00000496810 TRIP11Q15643 1979 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 GALTP07902 379 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 CYP11B2P19099 503 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 MLH1P40692 756 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 ALDH7A1P49419 539 aaKnown RBP21.63■■□□□ 1.05
COL20A1-208ENST00000496810 RNASELQ05823 741 aaKnown RBP21.63■■□□□ 1.05
COL20A1-208ENST00000496810 KCNC3Q14003 757 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 SMAD2Q15796 467 aaKnown RBP21.63■■□□□ 1.05
COL20A1-208ENST00000496810 PUS10Q3MIT2 529 aaKnown RBP21.63■■□□□ 1.05
COL20A1-208ENST00000496810 KCNK18Q7Z418 384 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 GJD3Q8N144 294 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 SMRP1Q8NCR6 262 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 PGBD4Q96DM1 585 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 ZFP42Q96MM3 310 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 GAD1Q99259 594 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 CSRNP2Q9H175 543 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 SMC3Q9UQE7 1217 aa21.63■■□□□ 1.05
COL20A1-208ENST00000496810 CNTNAP2Q9UHC6 1331 aa21.62■■□□□ 1.05
COL20A1-208ENST00000496810 H3BQV1 296 aa21.62■■□□□ 1.05
COL20A1-208ENST00000496810 SSTR3P32745 418 aaPredicted RBP21.62■■□□□ 1.05
COL20A1-208ENST00000496810 MCM2P49736 904 aa21.62■■□□□ 1.05
COL20A1-208ENST00000496810 ATP2C1P98194 919 aaPredicted RBP21.62■■□□□ 1.05
COL20A1-208ENST00000496810 LLGL2Q6P1M3 1020 aa21.62■■□□□ 1.05
COL20A1-208ENST00000496810 TMC7Q7Z402 723 aa21.62■■□□□ 1.05
COL20A1-208ENST00000496810 CCDC51Q96ER9 411 aa21.62■■□□□ 1.05
COL20A1-208ENST00000496810 TMEM169Q96HH4 297 aa21.62■■□□□ 1.05
COL20A1-208ENST00000496810 IGSF21Q96ID5 467 aa21.62■■□□□ 1.05
COL20A1-208ENST00000496810 ZBP1Q9H171 429 aa21.62■■□□□ 1.05
COL20A1-208ENST00000496810 PUF60Q9UHX1 559 aaKnown RBP21.62■■□□□ 1.05
COL20A1-208ENST00000496810 CDH22Q9UJ99 828 aa21.62■■□□□ 1.05
COL20A1-208ENST00000496810 PLXNA3P51805 1871 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 C2orf71A6NGG8 1288 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 ARL5CA6NH57 179 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 E9PMD0 336 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 F8W810 466 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 NPTXRO95502 500 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 EYA4O95677 639 aa21.61■■□□□ 1.05
COL20A1-208ENST00000496810 ITGA4P13612 1032 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms