RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 DCAF4L1Q3SXM0 396 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 CDCA2Q69YH5 1023 aaPredicted RBP8.39□□□□□ -1.07
CDHR3-214ENST00000496633 SLC27A1Q6PCB7 646 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 CCDC73Q6ZRK6 1079 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 MRPL10Q7Z7H8 261 aaKnown RBP8.39□□□□□ -1.07
CDHR3-214ENST00000496633 KSR1Q8IVT5 923 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.39□□□□□ -1.07
CDHR3-214ENST00000496633 KRI1Q8N9T8 703 aaKnown RBP8.39□□□□□ -1.07
CDHR3-214ENST00000496633 ZNF579Q8NAF0 562 aaKnown RBP8.39□□□□□ -1.07
CDHR3-214ENST00000496633 KCNG4Q8TDN1 519 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 LINC01599Q8WXQ3 324 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 ZNF558Q96NG5 402 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 FAM193BQ96PV7 902 aaPredicted RBP8.39□□□□□ -1.07
CDHR3-214ENST00000496633 C17orf80Q9BSJ5 609 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 OSBPL7Q9BZF2 842 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 CSRNP2Q9H175 543 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 NSUN3Q9H649 340 aaKnown RBP8.39□□□□□ -1.07
CDHR3-214ENST00000496633 TMEM134Q9H6X4 195 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 SLC24A3Q9HC58 644 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 NGRNQ9NPE2 291 aaKnown RBP8.39□□□□□ -1.07
CDHR3-214ENST00000496633 MTUS1Q9ULD2 1270 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 MTMR6Q9Y217 621 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 SSX2IPQ9Y2D8 614 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 GIT1Q9Y2X7 761 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 PCDHB2Q9Y5E7 798 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
CDHR3-214ENST00000496633 A0A1B0GUA9 196 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 ZBTB39O15060 712 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 MGEA5O60502 916 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 TSPAN1O60635 241 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 KRT18P05783 430 aaKnown RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 CHRM1P11229 460 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 ITGA4P13612 1032 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 MRPS5P82675 430 aaKnown RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 AMPD3Q01432 767 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 MBTD1Q05BQ5 628 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 RESTQ13127 1097 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 PRPF4BQ13523 1007 aaKnown RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 HSP90AA2PQ14568 343 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 SLC39A14Q15043 492 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 STK38Q15208 465 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 SKIV2LQ15477 1246 aaKnown RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 ZRSR1Q15695 479 aaKnown RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 KYAT1Q16773 422 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 NOMO2Q5JPE7 1267 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 ELMSAN1Q6PJG2 1045 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 TMCO2Q7Z6W1 182 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 ZNF598Q86UK7 904 aaKnown RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 THNSL1Q8IYQ7 743 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 RNF169Q8NCN4 708 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 SPIRE2Q8WWL2 714 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 KCNN1Q92952 543 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 HLA-CQ95604 372 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 TMEM169Q96HH4 297 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 CDCA3Q99618 268 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 TMEM175Q9BSA9 504 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 NTPCRQ9BSD7 190 aaKnown RBP8.38□□□□□ -1.07
CDHR3-214ENST00000496633 FZD8Q9H461 694 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 CUEDC2Q9H467 287 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 CERS4Q9HA82 394 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 RSAD1Q9HA92 442 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 KMT5AQ9NQR1 393 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 SPG21Q9NZD8 308 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 NLRC5Q86WI3 1866 aa8.38□□□□□ -1.07
CDHR3-214ENST00000496633 CCDC169A6NNP5 214 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 INPPL1O15357 1258 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 ZMYND10O75800 440 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 ALDH2P05091 517 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 SSBP05455 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDHR3-214ENST00000496633 PRKCBP05771 671 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 PLA2G4BP0C869 781 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 ZSCAN22P10073 491 aaPredicted RBP8.37□□□□□ -1.07
CDHR3-214ENST00000496633 PLS3P13797 630 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 HOXA11P31270 313 aaPredicted RBP8.37□□□□□ -1.07
CDHR3-214ENST00000496633 DDIT3P35638 169 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 NASPP49321 788 aaPredicted RBP8.37□□□□□ -1.07
CDHR3-214ENST00000496633 PEX3P56589 373 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 ALCAMQ13740 583 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 ADGRE1Q14246 886 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 TMEM119Q4V9L6 283 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 PAN2Q504Q3 1202 aaKnown RBP8.37□□□□□ -1.07
CDHR3-214ENST00000496633 RRAGBQ5VZM2 374 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 RINT1Q6NUQ1 792 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 KCNT2Q6UVM3 1135 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 C1orf186Q6ZWK4 172 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 TMEM87AQ8NBN3 555 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 LARP4BQ92615 738 aaKnown RBP8.37□□□□□ -1.07
CDHR3-214ENST00000496633 CCDC34Q96HJ3 373 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 CASD1Q96PB1 797 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 RPS6KC1Q96S38 1066 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 TSPAN18Q96SJ8 248 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 MRPL4Q9BYD3 311 aaKnown RBP8.37□□□□□ -1.07
CDHR3-214ENST00000496633 MAGEF1Q9HAY2 307 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 PARVGQ9HBI0 331 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 TOPORSQ9NS56 1045 aaPredicted RBP8.37□□□□□ -1.07
CDHR3-214ENST00000496633 TYW1Q9NV66 732 aaKnown RBP8.37□□□□□ -1.07
CDHR3-214ENST00000496633 SEL1LQ9UBV2 794 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 DPP7Q9UHL4 492 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 PLAGL2Q9UPG8 496 aa8.37□□□□□ -1.07
CDHR3-214ENST00000496633 MRPL42Q9Y6G3 142 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms