RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 AXDND1Q5T1B0 1012 aaPredicted RBP9.42□□□□□ -0.9
U2AF1-212ENST00000496462 C1orf53Q5VUE5 145 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 ZPBP2Q6X784 338 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 ZDHHC9Q9Y397 364 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 IL18RAPO95256 599 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 C22orf31O95567 290 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 PTMAP06454 111 aaKnown RBP9.42□□□□□ -0.9
U2AF1-212ENST00000496462 CCDC172P0C7W6 258 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 DARSP14868 501 aaKnown RBP9.42□□□□□ -0.9
U2AF1-212ENST00000496462 LRRC63Q05C16 580 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 LONRF3Q496Y0 759 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 SLC27A1Q6PCB7 646 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 TSPAN18Q96SJ8 248 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 SH2D3AQ9BRG2 576 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 IL23AQ9NPF7 189 aa9.42□□□□□ -0.9
U2AF1-212ENST00000496462 MYADML2A6NDP7 307 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 SFI1A8K8P3 1242 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 TOM1L1O75674 476 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 COL6A1P12109 1028 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 PAX3P23760 479 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 PSMC2P35998 433 aaKnown RBP9.41□□□□□ -0.9
U2AF1-212ENST00000496462 NPTX2P47972 431 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 NLRP12P59046 1061 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 PTENP60484 403 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 KMT5BQ4FZB7 885 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 MFSD5Q6N075 450 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 ANKRD33Q7Z3H0 272 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 ZBTB33Q86T24 672 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 THNSL1Q8IYQ7 743 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 CSGALNACT2Q8N6G5 542 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 FAM81BQ96LP2 452 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 COLEC11Q9BWP8 271 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 TYW1Q9NV66 732 aaKnown RBP9.41□□□□□ -0.9
U2AF1-212ENST00000496462 INPP5FQ9Y2H2 1132 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 PCDHB12Q9Y5F1 795 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 MYH6P13533 1939 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 A0A087WWV3 80 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 UPP2O95045 317 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 CLTAP09496 248 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 SPATA31C1P0DKV0 1188 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 SRGAP2BP0DMP2 458 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 MCF2P10911 925 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 DESP17661 470 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 CYP2J2P51589 502 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 FKBP3Q00688 224 aaKnown RBP9.41□□□□□ -0.9
U2AF1-212ENST00000496462 MYO1EQ12965 1108 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 NOLC1Q14978 699 aaKnown RBP eCLIP9.41□□□□□ -0.9
U2AF1-212ENST00000496462 CLEC17AQ6ZS10 378 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 GUF1Q8N442 669 aaKnown RBP9.41□□□□□ -0.9
U2AF1-212ENST00000496462 XXYLT1Q8NBI6 393 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 PNMA5Q96PV4 448 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 OLFML3Q9NRN5 406 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 ZNF862O60290 1169 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 GPC3P51654 580 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 PNOCQ13519 176 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 UGCGQ16739 394 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 KNOP1Q1ED39 458 aaKnown RBP9.41□□□□□ -0.9
U2AF1-212ENST00000496462 ADAM2Q99965 735 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 RUSC1Q9BVN2 902 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 KBTBD4Q9NVX7 518 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 AGO2Q9UKV8 859 aaKnown RBP9.41□□□□□ -0.9
U2AF1-212ENST00000496462 PCDHA5Q9Y5H7 936 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 CNTNAP2Q9UHC6 1331 aa9.41□□□□□ -0.9
U2AF1-212ENST00000496462 ASTN1O14525 1302 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 MYMKA6NI61 221 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 IPO7O95373 1038 aaKnown RBP9.4□□□□□ -0.9
U2AF1-212ENST00000496462 CYP2C18P33260 490 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 ELAVL2Q12926 359 aaKnown RBP9.4□□□□□ -0.9
U2AF1-212ENST00000496462 SNX17Q15036 470 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 TAF12Q16514 161 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 MPZL3Q6UWV2 235 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 ZNF668Q96K58 619 aaPredicted RBP9.4□□□□□ -0.9
U2AF1-212ENST00000496462 SLC9A7Q96T83 725 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 ARMCX3Q9UH62 379 aaPredicted RBP9.4□□□□□ -0.9
U2AF1-212ENST00000496462 SSX2IPQ9Y2D8 614 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 B4GALT4O60513 344 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 CD4P01730 458 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 CKBP12277 381 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 ADAM9Q13443 819 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 GIT2Q14161 759 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 BTG3Q14201 252 aaPredicted RBP9.4□□□□□ -0.9
U2AF1-212ENST00000496462 C1orf186Q6ZWK4 172 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 SLC24A5Q71RS6 500 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 RPAINQ86UA6 219 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 KIAA0319LQ8IZA0 1049 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 FMR1NBQ8N0W7 255 aaPredicted RBP9.4□□□□□ -0.9
U2AF1-212ENST00000496462 ZNF560Q96MR9 790 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 LMBRD1Q9NUN5 540 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 TBX20Q9UMR3 447 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 ST3GAL5Q9UNP4 418 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 PDXKO00764 312 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 GARTP22102 1010 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 CCNE1P24864 410 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 ALDH7A1P49419 539 aaKnown RBP9.4□□□□□ -0.9
U2AF1-212ENST00000496462 SLC8A3P57103 927 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 ISM2Q6H9L7 571 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 GPD1LQ8N335 351 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 MICAL1Q8TDZ2 1067 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 NELFBQ8WX92 580 aa9.4□□□□□ -0.9
U2AF1-212ENST00000496462 KAT2BQ92831 832 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms