RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 NOMO2Q5JPE7 1267 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 GLB1LQ6UWU2 654 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 CATSPER3Q86XQ3 398 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 IFNLR1Q8IU57 520 aaPredicted RBP15.89■□□□□ 0.13
VTI1A-209ENST00000496445 NRDE2Q9H7Z3 1164 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 DNAJB4Q9UDY4 337 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 PUF60Q9UHX1 559 aaKnown RBP15.89■□□□□ 0.13
VTI1A-209ENST00000496445 USP15Q9Y4E8 981 aaPredicted RBP15.89■□□□□ 0.13
VTI1A-209ENST00000496445 USO1O60763 962 aaKnown RBP15.88■□□□□ 0.13
VTI1A-209ENST00000496445 GPR37L1O60883 481 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 OR52Z1P0C646 297 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 TECP42680 631 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 KRT17Q04695 432 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 ORC2Q13416 577 aaPredicted RBP15.88■□□□□ 0.13
VTI1A-209ENST00000496445 MXD4Q14582 209 aaPredicted RBP15.88■□□□□ 0.13
VTI1A-209ENST00000496445 NBR1Q14596 966 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 TMEM31Q5JXX7 168 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 TTC38Q5R3I4 469 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 TMC7Q7Z402 723 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 ZNF280BQ86YH2 543 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 NOSTRINQ8IVI9 506 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 SMG8Q8ND04 991 aaKnown RBP15.88■□□□□ 0.13
VTI1A-209ENST00000496445 CPB2Q96IY4 423 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 CCDC43Q96MW1 224 aaKnown RBP15.88■□□□□ 0.13
VTI1A-209ENST00000496445 VN1R3Q9BXE9 311 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 EIF2AQ9BY44 585 aaKnown RBP15.88■□□□□ 0.13
VTI1A-209ENST00000496445 ZBP1Q9H171 429 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 POLR3FQ9H1D9 316 aaPredicted RBP15.88■□□□□ 0.13
VTI1A-209ENST00000496445 RSAD1Q9HA92 442 aa15.88■□□□□ 0.13
VTI1A-209ENST00000496445 FSD2A1L4K1 749 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 C2orf71A6NGG8 1288 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 DDHD2O94830 711 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 ERLIN2O94905 339 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 GALTP07902 379 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 NCLP19338 710 aaKnown RBP15.87■□□□□ 0.13
VTI1A-209ENST00000496445 SLC11A1P49279 550 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 ALDH7A1P49419 539 aaKnown RBP15.87■□□□□ 0.13
VTI1A-209ENST00000496445 POU5F1BQ06416 359 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 SMC1AQ14683 1233 aaKnown RBP15.87■□□□□ 0.13
VTI1A-209ENST00000496445 PCBP1Q15365 356 aaKnown RBP eCLIP15.87■□□□□ 0.13
VTI1A-209ENST00000496445 LLGL2Q6P1M3 1020 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 POTEGQ6S5H5 508 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 TMEM184AQ6ZMB5 413 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 C4orf32Q8N8J7 132 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 SUSD6Q92537 303 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 PGBD4Q96DM1 585 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 TMEM169Q96HH4 297 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 IGSF21Q96ID5 467 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 POP1Q99575 1024 aaKnown RBP15.87■□□□□ 0.13
VTI1A-209ENST00000496445 POLR3CQ9BUI4 534 aaPredicted RBP15.87■□□□□ 0.13
VTI1A-209ENST00000496445 NFKBIZQ9BYH8 718 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 GBP3Q9H0R5 595 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 TUFT1Q9NNX1 390 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 GPRC5CQ9NQ84 441 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 IPPQ9Y573 584 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 CNTNAP2Q9UHC6 1331 aa15.87■□□□□ 0.13
VTI1A-209ENST00000496445 INO80B-WBP1J3KQ70 363 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 DCXO43602 365 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 XRCC6P12956 609 aaKnown RBP eCLIP15.86■□□□□ 0.13
VTI1A-209ENST00000496445 ARF4P18085 180 aaPredicted RBP15.86■□□□□ 0.13
VTI1A-209ENST00000496445 AXLP30530 894 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 TFDP1Q14186 410 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 ANKRD54Q6NXT1 300 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 SYCE2Q6PIF2 218 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 MRPL43Q8N983 215 aaKnown RBP15.86■□□□□ 0.13
VTI1A-209ENST00000496445 FAM184AQ8NB25 1140 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 AUTS2Q8WXX7 1259 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 CCDC51Q96ER9 411 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 S1PR5Q9H228 398 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 DBR1Q9UK59 544 aaKnown RBP15.86■□□□□ 0.13
VTI1A-209ENST00000496445 HCFC2Q9Y5Z7 792 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 DENND4AQ7Z401 1863 aa15.86■□□□□ 0.13
VTI1A-209ENST00000496445 PLXNA3P51805 1871 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 INPPL1O15357 1258 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 B4GALT5O43286 388 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 CLASP2O75122 1294 aaKnown RBP15.85■□□□□ 0.13
VTI1A-209ENST00000496445 CD2BP2O95400 341 aaKnown RBP15.85■□□□□ 0.13
VTI1A-209ENST00000496445 ALADP13716 330 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
VTI1A-209ENST00000496445 RPA1P27694 616 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 TRAPPC10P48553 1259 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 TOB1P50616 345 aaPredicted RBP15.85■□□□□ 0.13
VTI1A-209ENST00000496445 RNASELQ05823 741 aaKnown RBP15.85■□□□□ 0.13
VTI1A-209ENST00000496445 GNL2Q13823 731 aaKnown RBP15.85■□□□□ 0.13
VTI1A-209ENST00000496445 RABEP1Q15276 862 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 ECM1Q16610 540 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 CDCA2Q69YH5 1023 aaPredicted RBP15.85■□□□□ 0.13
VTI1A-209ENST00000496445 NOTUMQ6P988 496 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 MAEAQ7L5Y9 396 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 DDX53Q86TM3 631 aaKnown RBP15.85■□□□□ 0.13
VTI1A-209ENST00000496445 VPS52Q8N1B4 723 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 URGCPQ8TCY9 931 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 CSRNP2Q9H175 543 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 HES2Q9Y543 173 aa15.85■□□□□ 0.13
VTI1A-209ENST00000496445 DMDP11532 3685 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.84■□□□□ 0.13
VTI1A-209ENST00000496445 LOC730098B7Z3J9 87 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 POMCP01189 267 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 SRGAP2BP0DMP2 458 aa15.84■□□□□ 0.13
VTI1A-209ENST00000496445 ITGA4P13612 1032 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms