RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 MPHOSPH6Q99547 160 aaKnown RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 ERP44Q9BS26 406 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 CCSER1Q9C0I3 900 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 OCEL1Q9H607 264 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 KCNQ5Q9NR82 932 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 FAM207AQ9NSI2 230 aaPredicted RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.74□□□□□ -0.85
HPS4-217ENST00000496385 ZSWIM5Q9P217 1185 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 LNPEPQ9UIQ6 1025 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 TRIM33Q9UPN9 1127 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 USH1CQ9Y6N9 552 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 COL4A5P29400 1685 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 SNED1Q8TER0 1413 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 TIAM2Q8IVF5 1701 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 TLDC2A0PJX2 215 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 TTI1O43156 1089 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 PABPC4LP0CB38 370 aaKnown RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 GM2AP17900 193 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 MAGEA10P43363 369 aaPredicted RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 NPEPPSP55786 919 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 RNASE9P60153 205 aaKnown RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 USP46P62068 366 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 SLC34A1Q06495 639 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 AUHQ13825 339 aaKnown RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 CENPPQ6IPU0 288 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 SLFN11Q7Z7L1 901 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 ALDH16A1Q8IZ83 802 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 LARGE2Q8N3Y3 721 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 SCG3Q8WXD2 468 aaKnown RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 RNF25Q96BH1 459 aaPredicted RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 TBC1D10AQ9BXI6 508 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 TMEM165Q9HC07 324 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 MTRF1LQ9UGC7 380 aaKnown RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 RASAL2Q9UJF2 1139 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 INTUQ9ULD6 942 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 PITPNM2Q9BZ72 1349 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 A0A0A6YYK5 440 aaPredicted RBP9.73□□□□□ -0.85
HPS4-217ENST00000496385 SMIM31A0A1B0GVY4 71 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 BIRC5O15392 142 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 PTPN4P29074 926 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 ADD2P35612 726 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 GJA8P48165 433 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 CDK7P50613 346 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 BPIFB4P59827 614 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 PTENP60484 403 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 KLRC3Q07444 240 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 CCDC92Q53HC0 331 aaPredicted RBP9.73□□□□□ -0.85
HPS4-217ENST00000496385 ARHGEF18Q6ZSZ5 1173 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 ECHDC2Q86YB7 292 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 METTL13Q8N6R0 699 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 LRRC57Q8N9N7 239 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 SERPINB12Q96P63 405 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 PHACTR1Q9C0D0 580 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 SAR1AQ9NR31 198 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 GGT7Q9UJ14 662 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 ZNF148Q9UQR1 794 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 SH3GLB1Q9Y371 365 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 STARD13Q9Y3M8 1113 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 ZNF804BA4D1E1 1349 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 PASKQ96RG2 1323 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 LRRC37AA6NMS7 1700 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 EPHB6O15197 1021 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 MAP3K7O43318 606 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 RAD21O60216 631 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 MBD4O95243 580 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 CPA3P15088 417 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 EIF4BP23588 611 aaKnown RBP9.73□□□□□ -0.85
HPS4-217ENST00000496385 GYG1P46976 350 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 PPARDQ03181 441 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 CBX3Q13185 183 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 GIT2Q14161 759 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 SLC29A2Q14542 456 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 KBTBD12Q3ZCT8 623 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 SOGA3Q5TF21 947 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 CNNM4Q6P4Q7 775 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 CCDC174Q6PII3 467 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 ZNF554Q86TJ5 538 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 EXOC3L1Q86VI1 746 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 SLC17A8Q8NDX2 589 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 SLC35B4Q969S0 331 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 YIPF2Q9BWQ6 316 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 DENND2DQ9H6A0 471 aaPredicted RBP9.73□□□□□ -0.85
HPS4-217ENST00000496385 CEP126Q9P2H0 1117 aa9.73□□□□□ -0.85
HPS4-217ENST00000496385 STX18Q9P2W9 335 aaKnown RBP9.73□□□□□ -0.85
HPS4-217ENST00000496385 CHD4Q14839 1912 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 STRNO43815 780 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 LYNP07948 512 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 RARGP13631 454 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 ZNF24P17028 368 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 LMNB1P20700 586 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 NAALADL2Q58DX5 795 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 AKNAD1Q5T1N1 836 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 CC2D2BQ6DHV5 1058 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 LRRC74BQ6ZQY2 392 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 TMC4Q7Z404 712 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 ZC3H18Q86VM9 953 aaKnown RBP9.72□□□□□ -0.85
HPS4-217ENST00000496385 CCNJLQ8IV13 435 aa9.72□□□□□ -0.85
HPS4-217ENST00000496385 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.72□□□□□ -0.85
HPS4-217ENST00000496385 SLC7A6OSQ96CW6 309 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms