RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 GOLGA6DP0CG33 693 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 ABCB4P21439 1286 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 ZSCAN26Q16670 478 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 PLA2G4FQ68DD2 849 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 SNRNP48Q6IEG0 339 aaKnown RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 ILDR2Q71H61 639 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 USP37Q86T82 979 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 RHOT2Q8IXI1 618 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 OLIG1Q8TAK6 271 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 FAM76AQ8TAV0 307 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 NSUN6Q8TEA1 469 aaKnown RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 RIN2Q8WYP3 895 aaPredicted RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 CDHR1Q96JP9 859 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 OSGEPQ9NPF4 335 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 GOLGA6AQ9NYA3 693 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 TBX20Q9UMR3 447 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 GJA3Q9Y6H8 435 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 BRCA1P38398 1863 aaKnown RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 TMEM150BA6NC51 233 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 C19orf81C9J6K1 198 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 KRIT1O00522 736 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 PTPRAP18433 802 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 CARSP49589 748 aaKnown RBP11.98□□□□□ -0.49
CMSS1-208ENST00000496116 CLUL1Q15846 466 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 SNRNP35Q16560 246 aaKnown RBP11.98□□□□□ -0.49
CMSS1-208ENST00000496116 MAP4K3Q8IVH8 894 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 C12orf42Q96LP6 360 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 WRNIP1Q96S55 665 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 KMT5AQ9NQR1 393 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 ZNF112Q9UJU3 913 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 RIPK3Q9Y572 518 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 PHIPQ8WWQ0 1821 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 ESYT3A0FGR9 886 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 BUB1BO60566 1050 aaPredicted RBP11.98□□□□□ -0.49
CMSS1-208ENST00000496116 PSAPP07602 524 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 CNGA1P29973 690 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 DSG3P32926 999 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 NPTX2P47972 431 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 HNRNPH2P55795 449 aaKnown RBP11.98□□□□□ -0.49
CMSS1-208ENST00000496116 MCCD1P59942 119 aaPredicted RBP11.98□□□□□ -0.49
CMSS1-208ENST00000496116 PPATQ06203 517 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 CUL1Q13616 776 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 PTPROQ16827 1216 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 KRT39Q6A163 491 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 ANO5Q75V66 913 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 MREGQ8N565 214 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 TMEM161BQ8NDZ6 487 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 CCDC26Q8TAB7 109 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 SPIRE2Q8WWL2 714 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 CEP170P1Q96L14 293 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 NAP1L3Q99457 506 aaPredicted RBP11.98□□□□□ -0.49
CMSS1-208ENST00000496116 SH3GL2Q99962 352 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 MAF1Q9H063 256 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 TMEM117Q9H0C3 514 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 THAP2Q9H0W7 228 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 ISCUQ9H1K1 167 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 TAF1DQ9H5J8 278 aaPredicted RBP11.98□□□□□ -0.49
CMSS1-208ENST00000496116 GABBR1Q9UBS5 961 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 USP20Q9Y2K6 914 aa11.98□□□□□ -0.49
CMSS1-208ENST00000496116 PFASO15067 1338 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 COL11A1P12107 1806 aaPredicted RBP11.97□□□□□ -0.49
CMSS1-208ENST00000496116 DENND3A2RUS2 1198 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 ZSCAN5CA6NGD5 496 aaPredicted RBP11.97□□□□□ -0.49
CMSS1-208ENST00000496116 STAM2O75886 525 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 ZBTB7AO95365 584 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 IVLP07476 585 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 ZBTB48P10074 688 aaPredicted RBP11.97□□□□□ -0.49
CMSS1-208ENST00000496116 ABCD1P33897 745 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 MFAP3P55082 362 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 C1orf220Q5T0J3 134 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 MAATS1Q7Z4T9 603 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 APOBEC3FQ8IUX4 373 aaKnown RBP11.97□□□□□ -0.49
CMSS1-208ENST00000496116 ARHGEF19Q8IW93 802 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 TSEN2Q8NCE0 465 aaKnown RBP11.97□□□□□ -0.49
CMSS1-208ENST00000496116 REPS2Q8NFH8 660 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 CASKIN2Q8WXE0 1202 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 ZKSCAN4Q969J2 545 aaPredicted RBP11.97□□□□□ -0.49
CMSS1-208ENST00000496116 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 NTPCRQ9BSD7 190 aaKnown RBP11.97□□□□□ -0.49
CMSS1-208ENST00000496116 SLITRK6Q9H5Y7 841 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 PPP1R1BQ9UD71 204 aaPredicted RBP11.97□□□□□ -0.49
CMSS1-208ENST00000496116 TTC7AQ9ULT0 858 aaPredicted RBP11.97□□□□□ -0.49
CMSS1-208ENST00000496116 LTBP3Q9NS15 1303 aa11.97□□□□□ -0.49
CMSS1-208ENST00000496116 GOLGA8IPA6NC78 632 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 GOLGA8JA6NMD2 632 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 FZD9O00144 591 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 SART1O43290 800 aaKnown RBP11.96□□□□□ -0.49
CMSS1-208ENST00000496116 DGAT1O75907 488 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 USP8P40818 1118 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 HMGCS2P54868 508 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 HADHBP55084 474 aaKnown RBP11.96□□□□□ -0.49
CMSS1-208ENST00000496116 PPP2R5EQ16537 467 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 GNPTABQ3T906 1256 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 CFAP58Q5T655 872 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 MCPH1Q8NEM0 835 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 AP1M1Q9BXS5 423 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 TEX13BQ9BXU2 312 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 CARD9Q9H257 536 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 PLEKHA4Q9H4M7 779 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 ACAD9Q9H845 621 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms