RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 PHKG2P15735 406 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 GLDCP23378 1020 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 CTSSP25774 331 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 RHBDL3P58872 404 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 PPP3CAQ08209 521 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 MGAT2Q10469 447 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 TOP3AQ13472 1001 aaPredicted RBP6.92□□□□□ -1.3
SSR3-208ENST00000496050 UBE3CQ15386 1083 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 COBLL1Q53SF7 1204 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 TRIM68Q6AZZ1 485 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 TAS1R1Q7RTX1 841 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 TTC7BQ86TV6 843 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 RTKN2Q8IZC4 609 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 ZCCHC14Q8WYQ9 949 aaKnown RBP6.92□□□□□ -1.3
SSR3-208ENST00000496050 DMRT3Q9NQL9 472 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 KMT5AQ9NQR1 393 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 SPATA6Q9NWH7 488 aaPredicted RBP6.92□□□□□ -1.3
SSR3-208ENST00000496050 CFAP20Q9Y6A4 193 aaKnown RBP6.92□□□□□ -1.3
SSR3-208ENST00000496050 PLA2G1BP04054 148 aaKnown RBP6.91□□□□□ -1.3
SSR3-208ENST00000496050 HNRNPLP14866 589 aaKnown RBP eCLIP6.91□□□□□ -1.3
SSR3-208ENST00000496050 ZNF28P17035 718 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 ETV4P43268 484 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 MEOX1P50221 254 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 STAT5BP51692 787 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 SAFBQ15424 915 aaKnown RBP eCLIP6.91□□□□□ -1.3
SSR3-208ENST00000496050 SYDE1Q6ZW31 735 aaPredicted RBP6.91□□□□□ -1.3
SSR3-208ENST00000496050 C11orf96Q7Z7L8 435 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 DENND1CQ8IV53 801 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 UNC5BQ8IZJ1 945 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 FAM43AQ8N2R8 423 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 Q8N3U1 123 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 MARCH10Q8NA82 808 aaPredicted RBP6.91□□□□□ -1.3
SSR3-208ENST00000496050 ZBTB34Q8NCN2 500 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 SNX33Q8WV41 574 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 FAM84AQ96KN4 292 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 PWWP2AQ96N64 755 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 TMEM168Q9H0V1 697 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 NTMQ9P121 344 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 USP25Q9UHP3 1055 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 PCDHA13Q9Y5I0 950 aa6.91□□□□□ -1.3
SSR3-208ENST00000496050 PRAMEF4O60810 478 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 TUSC2O75896 110 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 ENDOD1O94919 500 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 ADSLP30566 484 aaPredicted RBP6.9□□□□□ -1.3
SSR3-208ENST00000496050 CAP1Q01518 475 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 PICALMQ13492 652 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 IL10RAQ13651 578 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 BRD3Q15059 726 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 C3orf36Q3SXR2 165 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 SYCP2LQ5T4T6 812 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 Q6ZUG5 572 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 RHOT1Q8IXI2 618 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 NUDT10Q8NFP7 164 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.9□□□□□ -1.3
SSR3-208ENST00000496050 LPPQ93052 612 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 CYFIP2Q96F07 1278 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 RPS6KC1Q96S38 1066 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 CARD11Q9BXL7 1154 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 DDX21Q9NR30 783 aaKnown RBP eCLIP6.9□□□□□ -1.3
SSR3-208ENST00000496050 CNOT6Q9ULM6 557 aaKnown RBP6.9□□□□□ -1.3
SSR3-208ENST00000496050 PTPN22Q9Y2R2 807 aa6.9□□□□□ -1.3
SSR3-208ENST00000496050 ANO9A1A5B4 782 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 SLC16A6O15403 523 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 UBXN7O94888 489 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 ZBED1O96006 694 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 HRGP04196 525 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 CYP1A1P04798 512 aaPredicted RBP6.89□□□□□ -1.31
SSR3-208ENST00000496050 ECHS1P30084 290 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 SARSP49591 514 aaKnown RBP6.89□□□□□ -1.31
SSR3-208ENST00000496050 PER3P56645 1201 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 LLGL1Q15334 1064 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 CCDC157Q569K6 752 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 ABHD15Q6UXT9 468 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 CLEC14AQ86T13 490 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 SAPCD2Q86UD0 394 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 REXO1L1PQ8IX06 675 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 DRC7Q8IY82 874 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 SAMD3Q8N6K7 520 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 PLA2G15Q8NCC3 412 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 SVIPQ8NHG7 77 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 PMM1Q92871 262 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 GCDHQ92947 438 aaPredicted RBP6.89□□□□□ -1.31
SSR3-208ENST00000496050 AJUBAQ96IF1 538 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 POLR3GLQ9BT43 218 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 KATNBL1Q9H079 304 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 TMEM60Q9H2L4 133 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 MANSC1Q9H8J5 431 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 BARX1Q9HBU1 254 aaPredicted RBP6.89□□□□□ -1.31
SSR3-208ENST00000496050 POLHQ9Y253 713 aa6.89□□□□□ -1.31
SSR3-208ENST00000496050 TPD52L2O43399 206 aaKnown RBP6.88□□□□□ -1.31
SSR3-208ENST00000496050 SGTAO43765 313 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 TMEM127O75204 238 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 ALDH2P05091 517 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 MED14OSP0DP75 135 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 MYBP10242 640 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 IL12RB1P42701 662 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 FXR1P51114 621 aaKnown RBP eCLIP6.88□□□□□ -1.31
SSR3-208ENST00000496050 USP14P54578 494 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 DSC2Q02487 901 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms