RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 MYADMQ96S97 322 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 PLEKHA4Q9H4M7 779 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 C6orf50Q9HD87 102 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 CA14Q9ULX7 337 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 PIN4Q9Y237 131 aaKnown RBP15.13■□□□□ 0.01
COL1A1-209ENST00000495677 CNTNAP2Q9UHC6 1331 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 RALGAPA1Q6GYQ0 2036 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 INPPL1O15357 1258 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 EDIL3O43854 480 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 STBD1O95210 358 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 DCNP07585 359 aaKnown RBP15.12■□□□□ 0.01
COL1A1-209ENST00000495677 RFX1P22670 979 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 GNA11P29992 359 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 USP11P51784 963 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 XKR3Q5GH77 459 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 KIAA0319Q5VV43 1072 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 REXO1Q8N1G1 1221 aaKnown RBP15.12■□□□□ 0.01
COL1A1-209ENST00000495677 GPR152Q8TDT2 470 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 CCDC12Q8WUD4 166 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-209ENST00000495677 HERC2P3Q9BVR0 1158 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 GBP3Q9H0R5 595 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 BRPF3Q9ULD4 1205 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 INPP5FQ9Y2H2 1132 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 PCDHB2Q9Y5E7 798 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 ZFP37Q9Y6Q3 630 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-209ENST00000495677 NCOR2Q9Y618 2525 aa15.12■□□□□ 0.01
COL1A1-209ENST00000495677 NOTCH4Q99466 2003 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 ADAMTS3O15072 1205 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 MSH4O15457 936 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 TEX28O15482 410 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 MAFO75444 373 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-209ENST00000495677 GLUD1P00367 558 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 URODP06132 367 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 CDC27P30260 824 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 UGCGQ16739 394 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 LONRF3Q496Y0 759 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 DCLRE1AQ6PJP8 1040 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 MAML2Q8IZL2 1156 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-209ENST00000495677 DCLK2Q8N568 766 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 PJA1Q8NG27 643 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 SLC5A5Q92911 643 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 SHDQ96IW2 340 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 FAM193BQ96PV7 902 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-209ENST00000495677 HINFPQ9BQA5 517 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 JPH2Q9BR39 696 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-209ENST00000495677 NT5C3AQ9H0P0 336 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 RSAD1Q9HA92 442 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 IFT122Q9HBG6 1241 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 ARHGEF3Q9NR81 526 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 AGPAT5Q9NUQ2 364 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 ZDHHC7Q9NXF8 308 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 EPG5Q9HCE0 2579 aa15.11■□□□□ 0.01
COL1A1-209ENST00000495677 KINO60870 393 aaKnown RBP15.1■□□□□ 0.01
COL1A1-209ENST00000495677 SSBP05455 408 aaKnown RBP eCLIP15.1■□□□□ 0.01
COL1A1-209ENST00000495677 GLULP15104 373 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 DSG1Q02413 1049 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 RSPO4Q2I0M5 234 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-209ENST00000495677 TSGA10IPQ3SY00 556 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 B3GNT9Q6UX72 402 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 DHX32Q7L7V1 743 aaKnown RBP15.1■□□□□ 0.01
COL1A1-209ENST00000495677 CATSPER4Q7RTX7 472 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 RHPN2Q8IUC4 686 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 COLGALT2Q8IYK4 626 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 CNNM3Q8NE01 707 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 SMG7Q92540 1137 aaKnown RBP15.1■□□□□ 0.01
COL1A1-209ENST00000495677 ZNF707Q96C28 371 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-209ENST00000495677 CNTNAP3BQ96NU0 1288 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 DDX23Q9BUQ8 820 aaKnown RBP15.1■□□□□ 0.01
COL1A1-209ENST00000495677 TEKT3Q9BXF9 490 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 CNTNAP3Q9BZ76 1288 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 OSBPL6Q9BZF3 934 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 UBN1Q9NPG3 1134 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 CHST7Q9NS84 486 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 SUCLA2Q9P2R7 463 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-209ENST00000495677 FBXO4Q9UKT5 387 aa15.1■□□□□ 0.01
COL1A1-209ENST00000495677 CCDC196A0A1B0GTZ2 297 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 SPTLC1O15269 473 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 GAS7O60861 476 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 RFPL2O75678 378 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 PSMD10O75832 226 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 NCLP19338 710 aaKnown RBP15.09■□□□□ 0.01
COL1A1-209ENST00000495677 AFF1P51825 1210 aaKnown RBP15.09■□□□□ 0.01
COL1A1-209ENST00000495677 AK2P54819 239 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 HTR4Q13639 388 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 MTERF2Q49AM1 385 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 SPECC1Q5M775 1068 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 VARS2Q5ST30 1063 aaKnown RBP15.09■□□□□ 0.01
COL1A1-209ENST00000495677 LILRA6Q6PI73 481 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 TAS1R1Q7RTX1 841 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 SRGAP1Q7Z6B7 1085 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 BICD2Q8TD16 824 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 PRKD2Q9BZL6 878 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 UNC45AQ9H3U1 944 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 MARCH5Q9NX47 278 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 FNIP2Q9P278 1114 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 ACACBO00763 2458 aa15.09■□□□□ 0.01
COL1A1-209ENST00000495677 ARID2Q68CP9 1835 aa15.08■□□□□ 0.01
COL1A1-209ENST00000495677 GOLGA8AA7E2F4 631 aa15.08■□□□□ 0
COL1A1-209ENST00000495677 GOLGA8BA8MQT2 603 aa15.08■□□□□ 0
COL1A1-209ENST00000495677 C2CD2LO14523 706 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms