RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 MAST3O60307 1309 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 TIAM2Q8IVF5 1701 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 A0A1W2PQU0 124 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 F8W031 263 aaPredicted RBP6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 FZD9O00144 591 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 PSMD14O00487 310 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 PRICKLE3O43900 615 aaPredicted RBP6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 ZFYP08048 801 aaPredicted RBP6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 ERVFRD-1P60508 538 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 FKBP1AP62942 108 aaKnown RBP6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 CXCL9Q07325 125 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 GPR162Q16538 588 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 MCMDC2Q4G0Z9 681 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 SPTY2D1Q68D10 685 aaPredicted RBP6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 NAA16Q6N069 864 aaPredicted RBP6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 ZSCAN25Q6NSZ9 544 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 TMC6Q7Z403 805 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 TICAM2Q86XR7 235 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 DZIP1Q86YF9 867 aaKnown RBP6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 SYNPOQ8N3V7 929 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 ARHGEF39Q8N4T4 335 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 ENOX1Q8TC92 643 aaKnown RBP6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 JDP2Q8WYK2 163 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 APPBP2Q92624 585 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 GBP3Q9H0R5 595 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 HELLSQ9NRZ9 838 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 FANCLQ9NW38 375 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 APEX2Q9UBZ4 518 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 PFDN2Q9UHV9 154 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 FHOD1Q9Y613 1164 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 PTCH2Q9Y6C5 1203 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 MYH2Q9UKX2 1941 aa6.54□□□□□ -1.36
GAPVD1-218ENST00000495588 CCDC171Q6TFL3 1326 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 RAD50Q92878 1312 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 ZNF541Q9H0D2 1346 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 SSU72P8A0A1W2PR75 194 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 ESYT3A0FGR9 886 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 AKAP8O43823 692 aaKnown RBP6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 VIL1P09327 827 aaKnown RBP6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 ARL4AP40617 200 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 UBXN11Q5T124 520 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 ZNF662Q6ZS27 426 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 HOMER1Q86YM7 354 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 MIGA1Q8NAN2 632 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 TP53I13Q8NBR0 393 aaPredicted RBP6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 ZSWIM2Q8NEG5 633 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 SYTL5Q8TDW5 730 aaPredicted RBP6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 RUFY2Q8WXA3 655 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 MRGPRX3Q96LB0 322 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 LSG1Q9H089 658 aaKnown RBP6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 ARMT1Q9H993 441 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 ARHGEF4Q9NR80 690 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 SUGT1Q9Y2Z0 365 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 EMC9Q9Y3B6 208 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 PCDHB12Q9Y5F1 795 aa6.53□□□□□ -1.36
GAPVD1-218ENST00000495588 CCDC163A0A0D9SF12 145 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 AGRPO00253 132 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 FOXP2O15409 715 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 GPAA1O43292 621 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 BUB1BO60566 1050 aaPredicted RBP6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 PPM1BO75688 479 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 REC8O95072 547 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 MBD4O95243 580 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 FAM153BP0C7A2 387 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 ITGA4P13612 1032 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 PCBP3P57721 371 aaKnown RBP6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 RTP1P59025 263 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 CHMP4BP1P59074 171 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 ZNF445P59923 1031 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 DYNLL1P63167 89 aaKnown RBP6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 PTH1RQ03431 593 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 ZFYVE27Q5T4F4 411 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 VPS53Q5VIR6 699 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 C16orf86Q6ZW13 317 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 ZNF227Q86WZ6 799 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 LCORLQ8N3X6 602 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 BVESQ8NE79 360 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 KISS1RQ969F8 398 aaPredicted RBP6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 HHIPL1Q96JK4 782 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 RIOK1Q9BRS2 568 aaKnown RBP6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 FOXP3Q9BZS1 431 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 PRDM14Q9GZV8 571 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 FAM86C1Q9NVL1 165 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 AATFQ9NY61 560 aaKnown RBP eCLIP6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 RNF181Q9P0P0 153 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 KLHL14Q9P2G3 628 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 PCDHA5Q9Y5H7 936 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 PCDHAC2Q9Y5I4 1007 aa6.52□□□□□ -1.37
GAPVD1-218ENST00000495588 MROH7-TTC4A0A0A0MT08 1334 aa6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 GAKO14976 1311 aa6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 MYO3BQ8WXR4 1341 aa6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 GPR75-ASB3A0A0A6YYF3 556 aa6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 SHTN1A0MZ66 631 aa6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 SIGLEC6O43699 453 aa6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 PRKAB2O43741 272 aa6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 ITGAVP06756 1048 aa6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 LDHCP07864 332 aa6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 HSPD1P10809 573 aaKnown RBP6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 BTDP43251 543 aa6.51□□□□□ -1.37
GAPVD1-218ENST00000495588 SLURP1P55000 103 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms