RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PI4KAP2A4QPH2 592 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 ABLIM1O14639 778 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 DGKIO75912 1065 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 DDX58O95786 925 aaKnown RBP8.07□□□□□ -1.12
VIM-207ENST00000495528 CCT4P50991 539 aaKnown RBP8.07□□□□□ -1.12
VIM-207ENST00000495528 GNAI1P63096 354 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 ZNF200P98182 395 aaPredicted RBP8.07□□□□□ -1.12
VIM-207ENST00000495528 PAK1Q13153 545 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 PRKG1Q13976 671 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 TRIM61Q5EBN2 209 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 STRIP1Q5VSL9 837 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 CCDC30Q5VVM6 783 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 OLFML2BQ68BL8 750 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 SDE2Q6IQ49 451 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 OGFOD2Q6N063 350 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 KSR2Q6VAB6 950 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 DCP2Q8IU60 420 aaKnown RBP8.07□□□□□ -1.12
VIM-207ENST00000495528 RIOX2Q8IUF8 465 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 ZC3H7AQ8IWR0 971 aaKnown RBP8.07□□□□□ -1.12
VIM-207ENST00000495528 TSPYL6Q8N831 410 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 PI4KAP1Q8N8J0 262 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 GSTCDQ8NEC7 633 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 SCLYQ96I15 445 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 YTHDC1Q96MU7 727 aaKnown RBP8.07□□□□□ -1.12
VIM-207ENST00000495528 COA1Q9GZY4 146 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 AP5M1Q9H0R1 490 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 EPB41L1Q9H4G0 881 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 PLA2G2DQ9UNK4 145 aa8.07□□□□□ -1.12
VIM-207ENST00000495528 FAM47E-STBD1D6RA91 191 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 SGSM2O43147 1006 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 SMARCA5O60264 1052 aaPredicted RBP8.06□□□□□ -1.12
VIM-207ENST00000495528 SASH1O94885 1247 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 APPP05067 770 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 GNAT1P11488 350 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 KLRK1P26718 216 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 NF2P35240 595 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 NCKAP1LP55160 1127 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 RBM10P98175 930 aaKnown RBP8.06□□□□□ -1.12
VIM-207ENST00000495528 ZNF648Q5T619 568 aaPredicted RBP8.06□□□□□ -1.12
VIM-207ENST00000495528 TTLL5Q6EMB2 1281 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 SYDE1Q6ZW31 735 aaPredicted RBP8.06□□□□□ -1.12
VIM-207ENST00000495528 PCDH19Q8TAB3 1148 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 PIP4K2CQ8TBX8 421 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 KCNN1Q92952 543 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 TRIM39Q9HCM9 518 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 FZD1Q9UP38 647 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 MED23Q9ULK4 1368 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 PDE4DIPQ5VU43 2346 aa8.06□□□□□ -1.12
VIM-207ENST00000495528 PAPPA2Q9BXP8 1791 aa8.05□□□□□ -1.12
VIM-207ENST00000495528 FARP2O94887 1054 aaPredicted RBP8.05□□□□□ -1.12
VIM-207ENST00000495528 CALD1Q05682 793 aaKnown RBP8.05□□□□□ -1.12
VIM-207ENST00000495528 SREBF2Q12772 1141 aa8.05□□□□□ -1.12
VIM-207ENST00000495528 PABPC4Q13310 644 aaKnown RBP eCLIP8.05□□□□□ -1.121e-6■□□□□ 11
VIM-207ENST00000495528 FNDC3BQ53EP0 1204 aaKnown RBP8.05□□□□□ -1.12
VIM-207ENST00000495528 STEAP3Q658P3 488 aa8.05□□□□□ -1.12
VIM-207ENST00000495528 FBXO46Q6PJ61 603 aaPredicted RBP8.05□□□□□ -1.12
VIM-207ENST00000495528 G2E3Q7L622 706 aa8.05□□□□□ -1.12
VIM-207ENST00000495528 MILR1Q7Z6M3 343 aa8.05□□□□□ -1.12
VIM-207ENST00000495528 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.05□□□□□ -1.12
VIM-207ENST00000495528 SEC14L1Q92503 715 aa8.05□□□□□ -1.12
VIM-207ENST00000495528 ALG3Q92685 438 aa8.05□□□□□ -1.12
VIM-207ENST00000495528 ZBED3Q96IU2 234 aaPredicted RBP8.05□□□□□ -1.12
VIM-207ENST00000495528 KRTAP4-12Q9BQ66 201 aa8.05□□□□□ -1.12
VIM-207ENST00000495528 PALD1Q9ULE6 856 aa8.05□□□□□ -1.12
VIM-207ENST00000495528 ZNF804BA4D1E1 1349 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 MYO3BQ8WXR4 1341 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 AKAP11Q9UKA4 1901 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 SNAP23O00161 211 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 ARVCFO00192 962 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 ENPP3O14638 875 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 TNRC18O15417 2968 aaPredicted RBP8.04□□□□□ -1.12
VIM-207ENST00000495528 PEX10O60683 326 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 PYGMP11217 842 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 NAT1P18440 290 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 SDSP20132 328 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 IGHMBP2P38935 993 aaKnown RBP8.04□□□□□ -1.12
VIM-207ENST00000495528 DNM2P50570 870 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 MESP2Q0VG99 397 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 ARMC9Q7Z3E5 817 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 UBE3BQ7Z3V4 1068 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 KRTAP1-3Q8IUG1 177 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 RBM12BQ8IXT5 1001 aaKnown RBP8.04□□□□□ -1.12
VIM-207ENST00000495528 TSR2Q969E8 191 aaKnown RBP8.04□□□□□ -1.12
VIM-207ENST00000495528 CHMP4AQ9BY43 222 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 CNTD2Q9H8S5 307 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 CATSPERZQ9NTU4 200 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 MBD1Q9UIS9 605 aaPredicted RBP8.04□□□□□ -1.12
VIM-207ENST00000495528 COQ6Q9Y2Z9 468 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 PCDHAC2Q9Y5I4 1007 aa8.04□□□□□ -1.12
VIM-207ENST00000495528 TCRBV16S1A1N1A0A5B0 115 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 HGSO14964 777 aaPredicted RBP8.03□□□□□ -1.12
VIM-207ENST00000495528 NKRFO15226 690 aaKnown RBP eCLIP8.03□□□□□ -1.12
VIM-207ENST00000495528 CSF1RP07333 972 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 SLC6A11P48066 632 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 MMP14P50281 582 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 SPIRE1Q08AE8 756 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 NEXNQ0ZGT2 675 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 OTOP3Q7RTS5 596 aa8.03□□□□□ -1.12
VIM-207ENST00000495528 APOBEC3FQ8IUX4 373 aaKnown RBP8.03□□□□□ -1.12
VIM-207ENST00000495528 DHX37Q8IY37 1157 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms