RNA–Protein interactions for RNA: ENST00000495040.1

PLXNA3-208, Transcript of plexin A3, humanhuman

TSL 5

Gene PLXNA3, Length 421 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-208ENST00000495040 SRGAP2BP0DMP2 458 aa29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 COL9A1P20849 921 aa29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 RNASELQ05823 741 aaKnown RBP29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 CAPSQ13938 189 aa29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 UBXN11Q5T124 520 aa29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 CNNM3Q8NE01 707 aa29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 URGCPQ8TCY9 931 aa29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 NACC1Q96RE7 527 aa29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 NFKBIZQ9BYH8 718 aa29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 DBR1Q9UK59 544 aaKnown RBP29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 CNTNAP2Q9UHC6 1331 aa29.6■■■□□ 2.33
PLXNA3-208ENST00000495040 A0A087WWV3 80 aa29.59■■■□□ 2.33
PLXNA3-208ENST00000495040 USO1O60763 962 aaKnown RBP29.59■■■□□ 2.33
PLXNA3-208ENST00000495040 MED24O75448 989 aa29.59■■■□□ 2.33
PLXNA3-208ENST00000495040 SMC1AQ14683 1233 aaKnown RBP29.59■■■□□ 2.33
PLXNA3-208ENST00000495040 BMS1Q14692 1282 aaKnown RBP29.59■■■□□ 2.33
PLXNA3-208ENST00000495040 AGMOQ6ZNB7 445 aa29.59■■■□□ 2.33
PLXNA3-208ENST00000495040 CCDC51Q96ER9 411 aa29.59■■■□□ 2.33
PLXNA3-208ENST00000495040 NRDE2Q9H7Z3 1164 aa29.59■■■□□ 2.33
PLXNA3-208ENST00000495040 RSAD1Q9HA92 442 aa29.59■■■□□ 2.33
PLXNA3-208ENST00000495040 HIDE1A8MVS5 230 aa29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 TSPAN1O60635 241 aa29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 NCLP19338 710 aaKnown RBP29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 GLRA2P23416 452 aa29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 U2AF2P26368 475 aaKnown RBP eCLIP29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 RPA1P27694 616 aa29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 NOTUMQ6P988 496 aa29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 TMEM184AQ6ZMB5 413 aa29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 POLR3FQ9H1D9 316 aaPredicted RBP29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 UPF2Q9HAU5 1272 aaKnown RBP29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 UBN1Q9NPG3 1134 aa29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 KANSL3Q9P2N6 904 aa29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 C5orf42Q9H799 3197 aa29.58■■■□□ 2.33
PLXNA3-208ENST00000495040 GALTP07902 379 aa29.57■■■□□ 2.32
PLXNA3-208ENST00000495040 ALADP13716 330 aa29.57■■■□□ 2.32
PLXNA3-208ENST00000495040 MBTD1Q05BQ5 628 aa29.57■■■□□ 2.32
PLXNA3-208ENST00000495040 KCNC3Q14003 757 aa29.57■■■□□ 2.32
PLXNA3-208ENST00000495040 TMEM31Q5JXX7 168 aa29.57■■■□□ 2.32
PLXNA3-208ENST00000495040 MRPL43Q8N983 215 aaKnown RBP29.57■■■□□ 2.32
PLXNA3-208ENST00000495040 MCPH1Q8NEM0 835 aa29.57■■■□□ 2.32
PLXNA3-208ENST00000495040 VN1R2Q8NFZ6 395 aa29.57■■■□□ 2.32
PLXNA3-208ENST00000495040 KIF3AQ9Y496 699 aa29.57■■■□□ 2.32
PLXNA3-208ENST00000495040 MUTP22033 750 aa29.56■■■□□ 2.32
PLXNA3-208ENST00000495040 RBM10P98175 930 aaKnown RBP29.56■■■□□ 2.32
PLXNA3-208ENST00000495040 HAUS3Q68CZ6 603 aa29.56■■■□□ 2.32
PLXNA3-208ENST00000495040 IGSF21Q96ID5 467 aa29.56■■■□□ 2.32
PLXNA3-208ENST00000495040 GBP3Q9H0R5 595 aa29.56■■■□□ 2.32
PLXNA3-208ENST00000495040 GPR37L1O60883 481 aa29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 ITGA4P13612 1032 aa29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 FXR2P51116 673 aaKnown RBP eCLIP29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 POTEGQ6S5H5 508 aa29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 C4orf32Q8N8J7 132 aa29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 SMG8Q8ND04 991 aaKnown RBP29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 CPB2Q96IY4 423 aa29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 LRFN3Q9BTN0 628 aa29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 CSRNP2Q9H175 543 aa29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 USP15Q9Y4E8 981 aaPredicted RBP29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 IPPQ9Y573 584 aa29.55■■■□□ 2.32
PLXNA3-208ENST00000495040 C2orf71A6NGG8 1288 aa29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 AMHR2Q16671 573 aa29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 MAEAQ7L5Y9 396 aa29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 DDX53Q86TM3 631 aaKnown RBP29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 TMEM173Q86WV6 379 aaPredicted RBP29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 ZNF280BQ86YH2 543 aa29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 VPS52Q8N1B4 723 aa29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 FAM193BQ96PV7 902 aaPredicted RBP29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 EIF2AQ9BY44 585 aaKnown RBP29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 GPRC5CQ9NQ84 441 aa29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 DNAJB4Q9UDY4 337 aa29.54■■■□□ 2.32
PLXNA3-208ENST00000495040 CXCL14O95715 111 aa29.53■■■□□ 2.32
PLXNA3-208ENST00000495040 ARF4P18085 180 aaPredicted RBP29.53■■■□□ 2.32
PLXNA3-208ENST00000495040 SLC11A1P49279 550 aa29.53■■■□□ 2.32
PLXNA3-208ENST00000495040 NBR1Q14596 966 aa29.53■■■□□ 2.32
PLXNA3-208ENST00000495040 TMEM175Q9BSA9 504 aa29.53■■■□□ 2.32
PLXNA3-208ENST00000495040 ARHGEF35A5YM69 484 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 LRRIQ4A6NIV6 560 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 DCXO43602 365 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 DDHD2O94830 711 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 CA8P35219 290 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 AFF1P51825 1210 aaKnown RBP29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 GIT2Q14161 759 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 ANKRD54Q6NXT1 300 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 LLGL2Q6P1M3 1020 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 TRIM6Q9C030 488 aaPredicted RBP29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 ZBP1Q9H171 429 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 C11orf16Q9NQ32 467 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 STK39Q9UEW8 545 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 LRWD1Q9UFC0 647 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 STK24Q9Y6E0 443 aa29.52■■■□□ 2.32
PLXNA3-208ENST00000495040 ALDH2P05091 517 aa29.51■■■□□ 2.31
PLXNA3-208ENST00000495040 CTSAP10619 480 aa29.51■■■□□ 2.31
PLXNA3-208ENST00000495040 HOXB8P17481 243 aaPredicted RBP29.51■■■□□ 2.31
PLXNA3-208ENST00000495040 TOB1P50616 345 aaPredicted RBP29.51■■■□□ 2.31
PLXNA3-208ENST00000495040 PTGDRQ13258 359 aa29.51■■■□□ 2.31
PLXNA3-208ENST00000495040 PDIA5Q14554 519 aa29.51■■■□□ 2.31
PLXNA3-208ENST00000495040 PADI6Q6TGC4 694 aa29.51■■■□□ 2.31
PLXNA3-208ENST00000495040 HACE1Q8IYU2 909 aa29.51■■■□□ 2.31
PLXNA3-208ENST00000495040 CASP10Q92851 521 aa29.51■■■□□ 2.31
PLXNA3-208ENST00000495040 TMX3Q96JJ7 454 aa29.51■■■□□ 2.31
PLXNA3-208ENST00000495040 RAB34Q9BZG1 259 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms