RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 CCDC113Q9H0I3 377 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 C2orf40Q9H1Z8 148 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 RNF39Q9H2S5 420 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 ALG13Q9NP73 1137 aaKnown RBP15.89■□□□□ 0.13
SCAP-213ENST00000494938 USP20Q9Y2K6 914 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 XIRP2A4UGR9 3374 aa15.89■□□□□ 0.13
SCAP-213ENST00000494938 NPHP3-ACAD11A0A0J9YXS1 232 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 EDN1P05305 212 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 SSBP05455 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCAP-213ENST00000494938 ITGB1P05556 798 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 PLCG1P19174 1290 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 NCLP19338 710 aaKnown RBP15.88■□□□□ 0.13
SCAP-213ENST00000494938 DNAJB1P25685 340 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 NPTX2P47972 431 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 RAB27AP51159 221 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 AFF1P51825 1210 aaKnown RBP15.88■□□□□ 0.13
SCAP-213ENST00000494938 PPP2R5AQ15172 486 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 NOTUMQ6P988 496 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 ZBTB8OSQ8IWT0 167 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 DEPTORQ8TB45 409 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 PGBD4Q96DM1 585 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 CCDC51Q96ER9 411 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 CALML4Q96GE6 196 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 CDK5RAP3Q96JB5 506 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 IFT74Q96LB3 600 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 NTPCRQ9BSD7 190 aaKnown RBP15.88■□□□□ 0.13
SCAP-213ENST00000494938 C11orf84Q9BUA3 381 aaPredicted RBP15.88■□□□□ 0.13
SCAP-213ENST00000494938 TIPINQ9BVW5 301 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 PRMT7Q9NVM4 692 aaPredicted RBP15.88■□□□□ 0.13
SCAP-213ENST00000494938 ZDHHC9Q9Y397 364 aa15.88■□□□□ 0.13
SCAP-213ENST00000494938 ACKR2O00590 384 aa15.87■□□□□ 0.13
SCAP-213ENST00000494938 F13A1P00488 732 aa15.87■□□□□ 0.13
SCAP-213ENST00000494938 DDIT3P35638 169 aa15.87■□□□□ 0.13
SCAP-213ENST00000494938 PEX3P56589 373 aa15.87■□□□□ 0.13
SCAP-213ENST00000494938 RAD51AP2Q09MP3 1159 aa15.87■□□□□ 0.13
SCAP-213ENST00000494938 NT5DC1Q5TFE4 455 aa15.87■□□□□ 0.13
SCAP-213ENST00000494938 CDR2LQ86X02 465 aaPredicted RBP15.87■□□□□ 0.13
SCAP-213ENST00000494938 ABI1Q8IZP0 508 aa15.87■□□□□ 0.13
SCAP-213ENST00000494938 KRI1Q8N9T8 703 aaKnown RBP15.87■□□□□ 0.13
SCAP-213ENST00000494938 COLGALT1Q8NBJ5 622 aa15.87■□□□□ 0.13
SCAP-213ENST00000494938 SYMPKQ92797 1274 aaKnown RBP15.87■□□□□ 0.13
SCAP-213ENST00000494938 PRIMPOLQ96LW4 560 aa15.87■□□□□ 0.13
SCAP-213ENST00000494938 ZNF396Q96N95 335 aaPredicted RBP15.87■□□□□ 0.13
SCAP-213ENST00000494938 IPPQ9Y573 584 aa15.87■□□□□ 0.13
SCAP-213ENST00000494938 PRKCBP05771 671 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 EFNA5P52803 228 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 MCM6Q14566 821 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 MAPK6Q16659 721 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 PTPROQ16827 1216 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 FOXD4L6Q3SYB3 417 aaPredicted RBP15.86■□□□□ 0.13
SCAP-213ENST00000494938 NOMO2Q5JPE7 1267 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 SPOUT1Q5T280 376 aaKnown RBP15.86■□□□□ 0.13
SCAP-213ENST00000494938 GLB1LQ6UWU2 654 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 FOXD4L3Q6VB84 417 aaPredicted RBP15.86■□□□□ 0.13
SCAP-213ENST00000494938 TAS1R3Q7RTX0 852 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.86■□□□□ 0.13
SCAP-213ENST00000494938 CNNM3Q8NE01 707 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 RAD54LQ92698 747 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 DRC1Q96MC2 740 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 LMAN2LQ9H0V9 348 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 AAASQ9NRG9 546 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 KCND2Q9NZV8 630 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 HES2Q9Y543 173 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 PCDHB12Q9Y5F1 795 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 MYO9BQ13459 2157 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 LOXHD1Q8IVV2 1947 aa15.86■□□□□ 0.13
SCAP-213ENST00000494938 CCDC169A6NNP5 214 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 K7ERI5 159 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 SPTLC2O15270 562 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 BRD1O95696 1058 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 ITGA4P13612 1032 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 LAG3P18627 525 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 PRPF4BQ13523 1007 aaKnown RBP15.85■□□□□ 0.13
SCAP-213ENST00000494938 DHX8Q14562 1220 aaKnown RBP15.85■□□□□ 0.13
SCAP-213ENST00000494938 STK38Q15208 465 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 SLC27A1Q6PCB7 646 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 KCNT2Q6UVM3 1135 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 LRRC43Q8N309 656 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 SPIRE2Q8WWL2 714 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 PDZD7Q9H5P4 517 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 TMEM134Q9H6X4 195 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 C17orf75Q9HAS0 396 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 TBC1D13Q9NVG8 400 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 MIOSQ9NXC5 875 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 ARHGAP28Q9P2N2 729 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 CNTNAP2Q9UHC6 1331 aa15.85■□□□□ 0.13
SCAP-213ENST00000494938 A0A087X0B3 334 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 INPPL1O15357 1258 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 B4GALT3O60512 393 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 PPP6R2O75170 966 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 FGF18O76093 207 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 NPTXRO95502 500 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 YEATS4O95619 227 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 PLS3P13797 630 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 LIG1P18858 919 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 PBX3P40426 434 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
SCAP-213ENST00000494938 GIT2Q14161 759 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 EEF1DP3Q658K8 133 aa15.84■□□□□ 0.13
SCAP-213ENST00000494938 GPBP1Q86WP2 473 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms