RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 LRRC14Q15048 493 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 PPP2R5BQ15173 497 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 STXBP2Q15833 593 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 SLC35G1Q2M3R5 365 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 CREB3L3Q68CJ9 461 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 SEPT14Q6ZU15 432 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 FAM126BQ8IXS8 530 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 TMTC2Q8N394 836 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 DEFB123Q8N688 67 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 SLC43A3Q8NBI5 491 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 OR6J1Q8NGC5 347 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 COPS5Q92905 334 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 FAM46AQ96IP4 442 aaKnown RBP9.34□□□□□ -0.91
RIF1-211ENST00000494333 CCDC136Q96JN2 1154 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 CACNA2D2Q9NY47 1150 aa9.34□□□□□ -0.91
RIF1-211ENST00000494333 GRIN2DO15399 1336 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 RANBP2P49792 3224 aaKnown RBP9.33□□□□□ -0.92
RIF1-211ENST00000494333 CCDC69A6NI79 296 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 SART1O43290 800 aaKnown RBP9.33□□□□□ -0.92
RIF1-211ENST00000494333 ARIH2O95376 493 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 CD4P01730 458 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 MYL3P08590 195 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 HOXA13P31271 388 aaPredicted RBP9.33□□□□□ -0.92
RIF1-211ENST00000494333 CPT1AP50416 773 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 EPHB4P54760 987 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 RPS26P62854 115 aaKnown RBP9.33□□□□□ -0.92
RIF1-211ENST00000494333 PURAQ00577 322 aaKnown RBP9.33□□□□□ -0.92
RIF1-211ENST00000494333 SOX4Q06945 474 aaPredicted RBP9.33□□□□□ -0.92
RIF1-211ENST00000494333 TRAF1Q13077 416 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 BRDTQ58F21 947 aaPredicted RBP9.33□□□□□ -0.92
RIF1-211ENST00000494333 MFSD5Q6N075 450 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 NFXL1Q6ZNB6 911 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 AGMOQ6ZNB7 445 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 Q7L0L9 218 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 ZNF654Q8IZM8 581 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 CTCFLQ8NI51 663 aaPredicted RBP9.33□□□□□ -0.92
RIF1-211ENST00000494333 GPBAR1Q8TDU6 330 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 PIBF1Q8WXW3 757 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 TP53INP1Q96A56 240 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 TMEM87BQ96K49 555 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 IWS1Q96ST2 819 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 MTA3Q9BTC8 594 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 MYL10Q9BUA6 226 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 LY9Q9HBG7 655 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 MAP3K20Q9NYL2 800 aaKnown RBP9.33□□□□□ -0.92
RIF1-211ENST00000494333 TBX21Q9UL17 535 aa9.33□□□□□ -0.92
RIF1-211ENST00000494333 GCOM1H8Y6P7 765 aaPredicted RBP9.32□□□□□ -0.92
RIF1-211ENST00000494333 SH2B2O14492 632 aaPredicted RBP9.32□□□□□ -0.92
RIF1-211ENST00000494333 EIF3JO75822 258 aaKnown RBP9.32□□□□□ -0.92
RIF1-211ENST00000494333 POLR2MP0CAP2 368 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 ADH5P11766 374 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 MYCLP12524 364 aaPredicted RBP9.32□□□□□ -0.92
RIF1-211ENST00000494333 CSF2RAP15509 400 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 KIF5BP33176 963 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 RBM25P49756 843 aaKnown RBP9.32□□□□□ -0.92
RIF1-211ENST00000494333 HSD17B4P51659 736 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 LY6KQ17RY6 165 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 CCDC62Q6P9F0 684 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 ARMC10Q8N2F6 343 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 TMEM199Q8N511 208 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 SAMD3Q8N6K7 520 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 MAP3K14Q99558 947 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 MTG1Q9BT17 334 aaPredicted RBP9.32□□□□□ -0.92
RIF1-211ENST00000494333 RSRP1Q9BUV0 290 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 SEZ6LQ9BYH1 1024 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 TRPV6Q9H1D0 765 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 PXMP2Q9NR77 195 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 TLR6Q9Y2C9 796 aa9.32□□□□□ -0.92
RIF1-211ENST00000494333 B4GALT4O60513 344 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 KPNA6O60684 536 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 CDC45O75419 566 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 DDAH1O94760 285 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 GH1P01241 217 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 TFE3P19532 575 aaPredicted RBP9.31□□□□□ -0.92
RIF1-211ENST00000494333 RXRAP19793 462 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 CYP2C18P33260 490 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 LIFRP42702 1097 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 GNAQP50148 359 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 CHMP4BP1P59074 171 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 GHRHRQ02643 423 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 UVSSAQ2YD98 709 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 FAM47CQ5HY64 1035 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 SCARA3Q6AZY7 606 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 C16orf59Q7L2K0 433 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 C2CD4AQ8NCU7 369 aaPredicted RBP9.31□□□□□ -0.92
RIF1-211ENST00000494333 AFG1LQ8WV93 481 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 UTP4Q969X6 686 aaKnown RBP9.31□□□□□ -0.92
RIF1-211ENST00000494333 RRP36Q96EU6 259 aaKnown RBP9.31□□□□□ -0.92
RIF1-211ENST00000494333 RNPC3Q96LT9 517 aaKnown RBP9.31□□□□□ -0.92
RIF1-211ENST00000494333 NEK1Q96PY6 1258 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.31□□□□□ -0.925e-9■■■■□ 19.4
RIF1-211ENST00000494333 LZTS2Q9BRK4 669 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 PDCD2LQ9BRP1 358 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 LRRC2Q9BYS8 371 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 ALDH8A1Q9H2A2 487 aaPredicted RBP9.31□□□□□ -0.92
RIF1-211ENST00000494333 HIPK3Q9H422 1215 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 DDX41Q9UJV9 622 aaKnown RBP9.31□□□□□ -0.92
RIF1-211ENST00000494333 PCDHB5Q9Y5E4 795 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 SLC12A7Q9Y666 1083 aa9.31□□□□□ -0.92
RIF1-211ENST00000494333 MRVI1Q9Y6F6 885 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms