RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 PARVGQ9HBI0 331 aa11.15□□□□□ -0.62
RFC2-211ENST00000494019 CHST12Q9NRB3 414 aa11.15□□□□□ -0.62
RFC2-211ENST00000494019 ARHGAP28Q9P2N2 729 aa11.15□□□□□ -0.62
RFC2-211ENST00000494019 SERTAD1Q9UHV2 236 aa11.15□□□□□ -0.62
RFC2-211ENST00000494019 MSRAQ9UJ68 235 aa11.15□□□□□ -0.62
RFC2-211ENST00000494019 HPSEQ9Y251 543 aa11.15□□□□□ -0.62
RFC2-211ENST00000494019 YBX2Q9Y2T7 364 aaKnown RBP11.15□□□□□ -0.62
RFC2-211ENST00000494019 PCDHA11Q9Y5I1 949 aa11.15□□□□□ -0.62
RFC2-211ENST00000494019 ACTN4O43707 911 aaKnown RBP11.14□□□□□ -0.63
RFC2-211ENST00000494019 TRAK2O60296 914 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 EDN1P05305 212 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 STAG3L1P0CL83 205 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 MYOGP15173 224 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 ARF4P18085 180 aaPredicted RBP11.14□□□□□ -0.63
RFC2-211ENST00000494019 AXLP30530 894 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 HOXA11P31270 313 aaPredicted RBP11.14□□□□□ -0.63
RFC2-211ENST00000494019 FXR1P51114 621 aaKnown RBP eCLIP11.14□□□□□ -0.63
RFC2-211ENST00000494019 RAB27AP51159 221 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 NCKAP1LP55160 1127 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 ASIC1P78348 528 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 AMPD3Q01432 767 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 PRPF4BQ13523 1007 aaKnown RBP11.14□□□□□ -0.63
RFC2-211ENST00000494019 FAM187BQ17R55 369 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 NOTUMQ6P988 496 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 CDR2LQ86X02 465 aaPredicted RBP11.14□□□□□ -0.63
RFC2-211ENST00000494019 SFR1Q86XK3 245 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 FAM178BQ8IXR5 827 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 RNF169Q8NCN4 708 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 DNAJC19Q96DA6 116 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 YME1L1Q96TA2 773 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 TRIM9Q9C026 710 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 NKX2-4Q9H2Z4 354 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 FZD8Q9H461 694 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 FAM105AQ9NUU6 356 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 KBTBD4Q9NVX7 518 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 PCDHB7Q9Y5E2 793 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 LAMA3Q16787 3333 aa11.14□□□□□ -0.63
RFC2-211ENST00000494019 A0A0U1RQF3 1178 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 FAM237AA0A1B0GTK4 181 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 LCHNA4D1U4 455 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 H0YCG3 227 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 K7ERI5 159 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 CA3P07451 260 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 SLFN14P0C7P3 912 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 GAP43P17677 238 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 CASP1P29466 404 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 AFMP43652 599 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 HTRA4P83105 476 aaPredicted RBP11.13□□□□□ -0.63
RFC2-211ENST00000494019 STRN3Q13033 797 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 PPP2R2DQ66LE6 453 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 TAS1R3Q7RTX0 852 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 HAUS6Q7Z4H7 955 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 ECHDC2Q86YB7 292 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 GRAMD1CQ8IYS0 662 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 TMEM161BQ8NDZ6 487 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 TIFAQ96CG3 184 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 CCDC51Q96ER9 411 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 RAD9AQ99638 391 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 TRIM6Q9C030 488 aaPredicted RBP11.13□□□□□ -0.63
RFC2-211ENST00000494019 BLZF1Q9H2G9 400 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 TMEM134Q9H6X4 195 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 ELAC1Q9H777 363 aaKnown RBP11.13□□□□□ -0.63
RFC2-211ENST00000494019 PANK4Q9NVE7 773 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 RNF216Q9NWF9 866 aaPredicted RBP11.13□□□□□ -0.63
RFC2-211ENST00000494019 TMEM161AQ9NX61 479 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 KCNG1Q9UIX4 513 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 USP20Q9Y2K6 914 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 INSL6Q9Y581 213 aa11.13□□□□□ -0.63
RFC2-211ENST00000494019 FRMD3A2A2Y4 597 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 ACKR2O00590 384 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 N4BP3O15049 544 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 DGKIO75912 1065 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 NPTXRO95502 500 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 MAPTP10636 758 aaKnown RBP11.12□□□□□ -0.63
RFC2-211ENST00000494019 FGFR1P11362 822 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 SKIP12755 728 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 ATF7P17544 494 aaPredicted RBP11.12□□□□□ -0.63
RFC2-211ENST00000494019 NMT1P30419 496 aaKnown RBP11.12□□□□□ -0.63
RFC2-211ENST00000494019 GATMP50440 423 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 COASYQ13057 564 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 LONRF3Q496Y0 759 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 PAN2Q504Q3 1202 aaKnown RBP11.12□□□□□ -0.63
RFC2-211ENST00000494019 UBXN11Q5T124 520 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 ZNF697Q5TEC3 545 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 SLC27A1Q6PCB7 646 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 KRBA2Q6ZNG9 492 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 CCDC65Q8IXS2 484 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 TMEM87AQ8NBN3 555 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 CNNM3Q8NE01 707 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 ADPGKQ9BRR6 497 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 NTPCRQ9BSD7 190 aaKnown RBP11.12□□□□□ -0.63
RFC2-211ENST00000494019 TRAIPQ9BWF2 469 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 EIF2AQ9BY44 585 aaKnown RBP11.12□□□□□ -0.63
RFC2-211ENST00000494019 MRPL4Q9BYD3 311 aaKnown RBP11.12□□□□□ -0.63
RFC2-211ENST00000494019 PDZD7Q9H5P4 517 aa11.12□□□□□ -0.63
RFC2-211ENST00000494019 MRPL44Q9H9J2 332 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms