RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CYP26C1Q6V0L0 522 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 CTAGE6Q86UF2 777 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 CTAGE4Q8IX94 777 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 IFNL3Q8IZI9 196 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 LRRN4CLQ8ND94 238 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 CCDC148Q8NFR7 591 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 PPTC7Q8NI37 304 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 DHX58Q96C10 678 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 WDR24Q96S15 920 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 OSBPL7Q9BZF2 842 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 MAF1Q9H063 256 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 L1RE1Q9UN81 338 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 PCDHGC5Q9Y5F6 944 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 SLC12A7Q9Y666 1083 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 FAM208BQ5VWN6 2430 aa11.69□□□□□ -0.54
PDLIM1-205ENST00000493949 FRMPD2Q68DX3 1309 aaPredicted RBP11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 ERICH2A1L162 156 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 NRIP1P48552 1158 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 TRAPPC10P48553 1259 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 CTDSPL2Q05D32 466 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 CUL4BQ13620 913 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 NFXL1Q6ZNB6 911 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 SRLQ86TD4 932 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 PDILTQ8N807 584 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 IGSF22Q8N9C0 903 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 KRTAP3-3Q9BYR6 98 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 KRTAP3-2Q9BYR7 98 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 NACAP1Q9BZK3 213 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 ST7Q9NRC1 585 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 LIMA1Q9UHB6 759 aaKnown RBP11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 STX8Q9UNK0 236 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 SORCS3Q9UPU3 1222 aa11.68□□□□□ -0.54
PDLIM1-205ENST00000493949 ANKRD11Q6UB99 2663 aaPredicted RBP11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 A0A087WWV3 80 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 ANO9A1A5B4 782 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 PATL2C9JE40 543 aaKnown RBP11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 FANCGO15287 622 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 POLR3GO15318 223 aaPredicted RBP11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 PPFIA4O75335 1185 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 ITGB1P05556 798 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 ZNF286BP0CG31 522 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 CALM1P0DP23 149 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 CALM2P0DP24 149 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 CALM3P0DP25 149 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 BMP6P22004 513 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 NOVP48745 357 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 ITIH3Q06033 890 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 MTMR3Q13615 1198 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 LAMC2Q13753 1193 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 RTN1Q16799 776 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 CCDC96Q2M329 555 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 TMEM184AQ6ZMB5 413 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 TOGARAM2Q6ZUX3 1019 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 CHST3Q7LGC8 479 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 APTXQ7Z2E3 356 aaKnown RBP11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 ZBTB33Q86T24 672 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 DHX37Q8IY37 1157 aaKnown RBP11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 DIS3L2Q8IYB7 885 aaKnown RBP11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 KREMEN2Q8NCW0 462 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 NOC3LQ8WTT2 800 aaKnown RBP11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 DCAF4Q8WV16 495 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 HAUS4Q9H6D7 363 aa11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 RBM28Q9NW13 759 aaKnown RBP11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 ZNHIT6Q9NWK9 470 aaKnown RBP11.67□□□□□ -0.54
PDLIM1-205ENST00000493949 ATXN2Q99700 1313 aaKnown RBP11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 A0A1W2PQC6 194 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 POLR2DO15514 142 aaKnown RBP11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 SEC31AO94979 1220 aaKnown RBP11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 HAND2P61296 217 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 PPARAQ07869 468 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 BTG3Q14201 252 aaPredicted RBP11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 FAM26DQ5JW98 314 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 CCDC70Q6NSX1 233 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 SEPT14Q6ZU15 432 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 TBC1D10CQ8IV04 446 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 IPO4Q8TEX9 1081 aaKnown RBP11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 TBC1D5Q92609 795 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 ATP6V0A1Q93050 837 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 CDCA3Q99618 268 aaPredicted RBP11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 S1PR5Q9H228 398 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 YY1AP1Q9H869 796 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 ANKZF1Q9H8Y5 726 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 GPCPD1Q9NPB8 672 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 RWDD2AQ9UIY3 292 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 LOXHD1Q8IVV2 1947 aa11.66□□□□□ -0.54
PDLIM1-205ENST00000493949 MYO1CO00159 1063 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 SORBS3O60504 671 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 RANBP6O60518 1105 aaKnown RBP11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 DGKIO75912 1065 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 LMNAP02545 664 aaKnown RBP11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 CDC27P30260 824 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 MAGEA9P43362 315 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 PSEN1P49768 467 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 KRT83P78385 493 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 KCNC3Q14003 757 aa11.65□□□□□ -0.54
PDLIM1-205ENST00000493949 GBP6Q6ZN66 633 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms