RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792		C9IYK1	514 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	LINC00271	P0C7V0	271 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	NCL	P19338	710 aa	Known RBP	11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	ARL2	P36404	184 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	TXLNA	P40222	546 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	NCBP1	Q09161	790 aa	Known RBP	11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	RAD51AP2	Q09MP3	1159 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	PKP1	Q13835	747 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	DSC3	Q14574	896 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	KARS	Q15046	597 aa	Known RBP	11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	LONRF3	Q496Y0	759 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	SPOUT1	Q5T280	376 aa	Known RBP	11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	RNF135	Q8IUD6	432 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	ZBTB8OS	Q8IWT0	167 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	TMEM192	Q8IY95	271 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	DEPTOR	Q8TB45	409 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	IFT74	Q96LB3	600 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CLIC6	Q96NY7	704 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	PNMA5	Q96PV4	448 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	NSUN3	Q9H649	340 aa	Known RBP	11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	MINDY3	Q9H8M7	445 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	FAM50B	Q9Y247	325 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	ADGRA3	Q8IWK6	1321 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	COL4A4	P53420	1690 aa	Predicted RBP	11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	COL4A6	Q14031	1691 aa		11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	PTPRZ1	P23471	2315 aa	Predicted RBP	11.52	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	TBKBP1	A7MCY6	615 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	MBTPS2	O43462	519 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	DGKI	O75912	1065 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	KRT18	P05783	430 aa	Known RBP	11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	PLA2G4B	P0C869	781 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	FGFR1	P11362	822 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	PLCG1	P19174	1290 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CTNNB1	P35222	781 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	GATM	P50440	423 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	PTEN	P60484	403 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	SLC39A14	Q15043	492 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	PPP2R5A	Q15172	486 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	ABI1	Q8IZP0	508 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	KRI1	Q8N9T8	703 aa	Known RBP	11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	RUSC1	Q9BVN2	902 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CHST12	Q9NRB3	414 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	TMEM161A	Q9NX61	479 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CLDND1	Q9NY35	253 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CCDC39	Q9UFE4	941 aa		11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	FBXO2	Q9UK22	296 aa	Predicted RBP	11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	SRPRB	Q9Y5M8	271 aa	Known RBP	11.51	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	MYH15	Q9Y2K3	1946 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CCDC169	A6NNP5	214 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	C5orf67	F2Z3F1	127 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	SPTLC2	O15270	562 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	NCK2	O43639	380 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	HIP1R	O75146	1068 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	NAMPT	P43490	491 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	PTPN5	P54829	565 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	HYAL1	Q12794	435 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	TMEM119	Q4V9L6	283 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	HYI	Q5T013	277 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	RRAGB	Q5VZM2	374 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	RINT1	Q6NUQ1	792 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	EP400NL	Q6ZTU2	488 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	USP49	Q70CQ1	688 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	GPBP1	Q86WP2	473 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	ECHDC2	Q86YB7	292 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CRIPAK	Q8N1N5	446 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	BSND	Q8WZ55	320 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	KIFAP3	Q92845	792 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CPB2	Q96IY4	423 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	EPSTI1	Q96J88	318 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	DRC1	Q96MC2	740 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	ZHX3	Q9H4I2	956 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	RC3H2	Q9HBD1	1191 aa	Known RBP	11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	AGPAT5	Q9NUQ2	364 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CACNA1H	O95180	2353 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	TTC3	P53804	2025 aa		11.5	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	SFI1	A8K8P3	1242 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	GRM6	O15303	877 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	HOXA2	O43364	376 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	SLC26A4	O43511	780 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	TSPAN1	O60635	241 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CSPG5	O95196	566 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	RB1	P06400	928 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	SKI	P12755	728 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	AXL	P30530	894 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	BMPR1A	P36894	532 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	NASP	P49321	788 aa	Predicted RBP	11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	PEX3	P56589	373 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CACNB1	Q02641	598 aa	Predicted RBP	11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	DNM1	Q05193	864 aa	Known RBP	11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	MBTD1	Q05BQ5	628 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	POU5F1B	Q06416	359 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	DMP1	Q13316	513 aa	Predicted RBP	11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CAMK1	Q14012	370 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	MCM6	Q14566	821 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	TRIM67	Q6ZTA4	783 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	CMTR2	Q8IYT2	770 aa	Known RBP	11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	KCTD17	Q8N5Z5	321 aa		11.49	□□□□□ -0.57
TRAPPC12-222	ENST00000493792	SYT2	Q8N9I0	419 aa	Predicted RBP	11.49	□□□□□ -0.57

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