RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 IL1RAPL1Q9NZN1 696 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 ZMAT5Q9UDW3 170 aaKnown RBP7.34□□□□□ -1.23
VPS13B-205ENST00000493587 SPATA31A5Q5VU36 1347 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 SPATA31A7Q8IWB4 1347 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 CARMIL3Q8ND23 1372 aa7.34□□□□□ -1.24
VPS13B-205ENST00000493587 WDR91A4D1P6 747 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 CFAP69A5D8W1 941 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 SERPINB7O75635 380 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 FBXO21O94952 628 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 GFPT1Q06210 699 aaPredicted RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 UBE4AQ14139 1066 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 PCSK7Q16549 785 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 TJAP1Q5JTD0 557 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 FAM209AQ5JX71 171 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 ISLR2Q6UXK2 745 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 NLRP9Q7RTR0 991 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 GRAMD2AQ8IUY3 354 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 GRAMD1CQ8IYS0 662 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 PDZD8Q8NEN9 1154 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 VPS37AQ8NEZ2 397 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 GSDMBQ8TAX9 411 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 OSCP1Q8WVF1 389 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 COQ7Q99807 217 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 MLXIPQ9HAP2 919 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 PTTG2Q9NZH5 202 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 LRWD1Q9UFC0 647 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 GIT1Q9Y2X7 761 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 TELO2Q9Y4R8 837 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 HIP1O00291 1037 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 TTI1O43156 1089 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 TMCC2O75069 709 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 ENO2P09104 434 aaPredicted RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 PAEPP09466 180 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 OCM2P0CE71 109 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 OCMP0CE72 109 aaPredicted RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 FOSL1P15407 271 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 HSPA9P38646 679 aaKnown RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 AFMP43652 599 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 SLCO1A2P46721 670 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 NMIQ13287 307 aaPredicted RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 TRIM14Q14142 442 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 CNGA3Q16281 694 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 SHROOM1Q2M3G4 852 aaPredicted RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 CMPK2Q5EBM0 449 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 NEPROQ6NW34 567 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 IZUMO2Q6UXV1 221 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 RBM44Q6ZP01 1051 aaKnown RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 PIGWQ7Z7B1 504 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 METTL16Q86W50 562 aaKnown RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 SCYL3Q8IZE3 742 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 VPS52Q8N1B4 723 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 FNBP1Q96RU3 617 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 ARMC7Q9H6L4 198 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 RXFP1Q9HBX9 757 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 ZNF304Q9HCX3 659 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 GINM1Q9NU53 330 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 SCHIP1Q9P0W5 487 aaPredicted RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 ADAMTSL1Q8N6G6 1762 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 BRCA1P38398 1863 aaKnown RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 KRT36O76013 467 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 CIAO1O76071 339 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 ZBED1O96006 694 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 ZNF18P17022 549 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 CHKAP35790 457 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 ARL1P40616 181 aaPredicted RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 IRF5Q13568 498 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 ACAP1Q15027 740 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 GSTA3Q16772 222 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 RC3H1Q5TC82 1133 aaKnown RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 CHADLQ6NUI6 762 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 FITM2Q8N6M3 262 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 STARD8Q92502 1023 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 NCSTNQ92542 709 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 BHMT2Q9H2M3 363 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 AS3MTQ9HBK9 375 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 GID8Q9NWU2 228 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 DBNLQ9UJU6 430 aaKnown RBP7.33□□□□□ -1.24
VPS13B-205ENST00000493587 IKBKGQ9Y6K9 419 aa7.33□□□□□ -1.24
VPS13B-205ENST00000493587 CYTH3O43739 400 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 HAUS5O94927 633 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 UNC5CO95185 931 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 CDK4P11802 303 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 PLCD1P51178 756 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 HERVK_113P62684 666 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 ATP1A4Q13733 1029 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 KCTD19Q17RG1 926 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 SPATA1Q5VX52 437 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 ANKRD13DQ6ZTN6 518 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 LRRC49Q8IUZ0 686 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 FAM20CQ8IXL6 584 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 MREGQ8N565 214 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 U2AF1L4Q8WU68 220 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 LPIN2Q92539 896 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 GATA6Q92908 595 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 ZNF512BQ96KM6 892 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 CCDC85AQ96PX6 553 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 IFIH1Q9BYX4 1025 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 DPH5Q9H2P9 285 aa7.32□□□□□ -1.24
VPS13B-205ENST00000493587 REXO2Q9Y3B8 237 aaKnown RBP7.32□□□□□ -1.24
VPS13B-205ENST00000493587 MROH7-TTC4A0A0A0MT08 1334 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms