RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 B3GNT9Q6UX72 402 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 CATSPERGQ6ZRH7 1159 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 ZNF662Q6ZS27 426 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 HS2ST1Q7LGA3 356 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 BTLAQ7Z6A9 289 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 TPH2Q8IWU9 490 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 CPXCR1Q8N123 301 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 SYN2Q92777 582 aaPredicted RBP11.02□□□□□ -0.65
PRPF3-206ENST00000493553 CCDC97Q96F63 343 aaPredicted RBP11.02□□□□□ -0.65
PRPF3-206ENST00000493553 RMDN3Q96TC7 470 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 P2RX7Q99572 595 aaKnown RBP11.02□□□□□ -0.65
PRPF3-206ENST00000493553 GLIS2Q9BZE0 524 aaPredicted RBP11.02□□□□□ -0.65
PRPF3-206ENST00000493553 BHMT2Q9H2M3 363 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 ACAD9Q9H845 621 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 RRAGCQ9HB90 399 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 RAVER2Q9HCJ3 691 aaKnown RBP11.02□□□□□ -0.65
PRPF3-206ENST00000493553 KCNH7Q9NS40 1196 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 RNF146Q9NTX7 359 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 TYW1Q9NV66 732 aaKnown RBP11.02□□□□□ -0.65
PRPF3-206ENST00000493553 LARSQ9P2J5 1176 aaKnown RBP11.02□□□□□ -0.65
PRPF3-206ENST00000493553 KCNH4Q9UQ05 1017 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
PRPF3-206ENST00000493553 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 SHTN1A0MZ66 631 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 WDR64B1ANS9 1081 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 CTIFO43310 598 aaKnown RBP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 ATG7O95352 703 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 EGFRP00533 1210 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 ANXA13P27216 316 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 HNRNPH3P31942 346 aaKnown RBP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 EPS15P42566 896 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 QARSP47897 775 aaKnown RBP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 RPS6P62753 249 aaKnown RBP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 SPEM2Q0P670 501 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 ADAM9Q13443 819 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 GRIN2CQ14957 1233 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 MEA1Q16626 185 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 ARHGAP29Q52LW3 1261 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 ARSHQ5FYA8 562 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 ZNF746Q6NUN9 644 aaPredicted RBP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 RINT1Q6NUQ1 792 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 LRRC55Q6ZSA7 311 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 EPM2AIP1Q7L775 607 aaPredicted RBP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 SYT9Q86SS6 491 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 SMAP1Q8IYB5 467 aaPredicted RBP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 NEK11Q8NG66 645 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 CPLX3Q8WVH0 158 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 SLC30A3Q99726 388 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 SENP7Q9BQF6 1050 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 REEP2Q9BRK0 252 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 MKNK1Q9BUB5 465 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 ZHX3Q9H4I2 956 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 MRPL44Q9H9J2 332 aaKnown RBP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 AGO4Q9HCK5 861 aaKnown RBP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 ANKEF1Q9NU02 776 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRPF3-206ENST00000493553 PFASO15067 1338 aa11.01□□□□□ -0.65
PRPF3-206ENST00000493553 TTC26A0AVF1 554 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 TGFBR3LH3BV60 316 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 NFIBO00712 420 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 CXCL11O14625 94 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 SIN3BO75182 1162 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 EPB41P11171 864 aaKnown RBP11□□□□□ -0.65
PRPF3-206ENST00000493553 ITGB5P18084 799 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 CASQ1P31415 396 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 FXR1P51114 621 aaKnown RBP eCLIP11□□□□□ -0.65
PRPF3-206ENST00000493553 ZNF131P52739 623 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 PSMC5P62195 406 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 C1orf186Q6ZWK4 172 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 USP50Q70EL3 339 aaPredicted RBP11□□□□□ -0.65
PRPF3-206ENST00000493553 OTUD6AQ7L8S5 288 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 VSIG10LQ86VR7 867 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 C4orf19Q8IY42 314 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 DNERQ8NFT8 737 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 NLGN2Q8NFZ4 835 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11□□□□□ -0.65
PRPF3-206ENST00000493553 CYP2W1Q8TAV3 490 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 TRPM4Q8TD43 1214 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 GTF3C2Q8WUA4 911 aaPredicted RBP11□□□□□ -0.65
PRPF3-206ENST00000493553 TMEM174Q8WUU8 243 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 SCFD1Q8WVM8 642 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 ATP6V0A1Q93050 837 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 VTI1AQ96AJ9 217 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 ERO1AQ96HE7 468 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 DYDC2Q96IM9 177 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 DRC1Q96MC2 740 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 MDFIQ99750 246 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 PDCD2LQ9BRP1 358 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 TSGA10Q9BZW7 698 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 KCTD10Q9H3F6 313 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 UNC45AQ9H3U1 944 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 HAUS4Q9H6D7 363 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 TMEM206Q9H813 350 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 L2HGDHQ9H9P8 463 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 C17orf75Q9HAS0 396 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 PXMP2Q9NR77 195 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 ARMCX3Q9UH62 379 aaPredicted RBP11□□□□□ -0.65
PRPF3-206ENST00000493553 MYO6Q9UM54 1294 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 AFG3L2Q9Y4W6 797 aa11□□□□□ -0.65
PRPF3-206ENST00000493553 NFASCO94856 1347 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms