RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 PCDHB2Q9Y5E7 798 aa12.33□□□□□ -0.44
SNRNP200-207ENST00000493271 ASAP2O43150 1006 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 NR1I2O75469 434 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 STBD1O95210 358 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 NLRP5P59047 1200 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 NTRK3Q16288 839 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 GALNT17Q6IS24 598 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 ZC3H14Q6PJT7 736 aaKnown RBP12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 BLOC1S2Q6QNY1 142 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 Q6ZUG5 572 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 ZNF280BQ86YH2 543 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 SIX5Q8N196 739 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 TBCKQ8TEA7 893 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 BORCS6Q96GS4 357 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 NLRP4Q96MN2 994 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 YTHDC1Q96MU7 727 aaKnown RBP12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 RPS6KC1Q96S38 1066 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 HERC2P3Q9BVR0 1158 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 VN1R3Q9BXE9 311 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 IFT122Q9HBG6 1241 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 WDR6Q9NNW5 1121 aaKnown RBP12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 COL4A3BPQ9Y5P4 624 aa12.32□□□□□ -0.44
SNRNP200-207ENST00000493271 DDX11L8A8MPP1 907 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 NRP1O14786 923 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 ADAMTS3O15072 1205 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 INPPL1O15357 1258 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 EDIL3O43854 480 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 PAPLNO95428 1278 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 GLUD1P00367 558 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 LMNAP02545 664 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 SRFP11831 508 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 NCLP19338 710 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 RFX1P22670 979 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 AXLP30530 894 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 RFC5P40937 340 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 GLUD2P49448 558 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 NCBP1Q09161 790 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 PHLDB3Q6NSJ2 640 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 KANK3Q6NY19 840 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 AGMOQ6ZNB7 445 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 ANO5Q75V66 913 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 PSPC1Q8WXF1 523 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 KCNB2Q92953 911 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 PHKBQ93100 1093 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 CCDC51Q96ER9 411 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 MBOAT7Q96N66 472 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 PLEKHA4Q9H4M7 779 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 MAN1C1Q9NR34 630 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 VPS54Q9P1Q0 977 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 PCDHA4Q9UN74 947 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 ZFP37Q9Y6Q3 630 aaPredicted RBP12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 CLUHO75153 1309 aa12.31□□□□□ -0.44
SNRNP200-207ENST00000493271 GVINP1Q7Z2Y8 2422 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 CCDC195A0A1B0GUA6 201 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 MEIS3P2A8K0S8 358 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 PI15O43692 258 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 CDC45O75419 566 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 DDHD2O94830 711 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 GBP2P32456 591 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 QARSP47897 775 aaKnown RBP12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 AK2P54819 239 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 EVCP57679 992 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 CREMQ03060 361 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 HACE1Q8IYU2 909 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 RNF168Q8IYW5 571 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 DAGLBQ8NCG7 672 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 ETNPPLQ8TBG4 499 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 JAKMIP1Q96N16 626 aaKnown RBP12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 DHX33Q9H6R0 707 aaKnown RBP12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 RXFP1Q9HBX9 757 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 ZDHHC7Q9NXF8 308 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 ZMYM2Q9UBW7 1377 aa12.3□□□□□ -0.44
SNRNP200-207ENST00000493271 CACNA1AO00555 2505 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 STK25O00506 426 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 TEX28O15482 410 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 ERLIN2O94905 339 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 EFEMP2O95967 443 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 POMCP01189 267 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 SSBP05455 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 P4HBP07237 508 aaKnown RBP12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 ITGA4P13612 1032 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 PSMA5P28066 241 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 DSG1Q02413 1049 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 PPP2R5CQ13362 524 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 LONRF3Q496Y0 759 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 OTUD6AQ7L8S5 288 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 KSR1Q8IVT5 923 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 NAP1L4Q99733 375 aaKnown RBP12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 ZNF292O60281 2723 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 DCHS1Q96JQ0 3298 aa12.29□□□□□ -0.44
SNRNP200-207ENST00000493271 TMEM150BA6NC51 233 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 TBX3O15119 743 aa12.28□□□□□ -0.44
SNRNP200-207ENST00000493271 B4GALT3O60512 393 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms