RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 DACT1Q9NYF0 836 aa18.57■□□□□ 0.56
RER1-208ENST00000493207 KCNG1Q9UIX4 513 aa18.57■□□□□ 0.56
RER1-208ENST00000493207 TRIOBPQ9H2D6 2365 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 CNTNAP2Q9UHC6 1331 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 TTLL13PA6NNM8 815 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 K7ENM7 598 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 SOX1O00570 391 aaPredicted RBP18.56■□□□□ 0.56
RER1-208ENST00000493207 TRAK2O60296 914 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 EDN1P05305 212 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 ARF4P18085 180 aaPredicted RBP18.56■□□□□ 0.56
RER1-208ENST00000493207 PBX2P40425 430 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 NCKAP1LP55160 1127 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 ASIC1P78348 528 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 SMAD3P84022 425 aaKnown RBP18.56■□□□□ 0.56
RER1-208ENST00000493207 PRPF4BQ13523 1007 aaKnown RBP18.56■□□□□ 0.56
RER1-208ENST00000493207 FAM187BQ17R55 369 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 TMEM132AQ24JP5 1023 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 NOTUMQ6P988 496 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 TAS1R3Q7RTX0 852 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 FAM178BQ8IXR5 827 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 TMEM161BQ8NDZ6 487 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 C7orf25Q9BPX7 421 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 BLZF1Q9H2G9 400 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 TMEM134Q9H6X4 195 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 PANK4Q9NVE7 773 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 LRFN2Q9ULH4 789 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 USP20Q9Y2K6 914 aa18.56■□□□□ 0.56
RER1-208ENST00000493207 FRMD3A2A2Y4 597 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 H0YCG3 227 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 ACKR2O00590 384 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 TLL1O43897 1013 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 GJB5O95377 273 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 MAPTP10636 758 aaKnown RBP18.55■□□□□ 0.56
RER1-208ENST00000493207 GAP43P17677 238 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 NMT1P30419 496 aaKnown RBP18.55■□□□□ 0.56
RER1-208ENST00000493207 CUL4BQ13620 913 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 KRBA2Q6ZNG9 492 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 CLEC17AQ6ZS10 378 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 HAUS6Q7Z4H7 955 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 CDR2LQ86X02 465 aaPredicted RBP18.55■□□□□ 0.56
RER1-208ENST00000493207 NPAS4Q8IUM7 802 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 CCDC65Q8IXS2 484 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 FMR1NBQ8N0W7 255 aaPredicted RBP18.55■□□□□ 0.56
RER1-208ENST00000493207 CNNM3Q8NE01 707 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 PBX4Q9BYU1 374 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 TBC1D7Q9P0N9 293 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 PCDHB7Q9Y5E2 793 aa18.55■□□□□ 0.56
RER1-208ENST00000493207 A0A0U1RQF3 1178 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 PRPF40AO75400 957 aaKnown RBP18.54■□□□□ 0.56
RER1-208ENST00000493207 STAG3L1P0CL83 205 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 MYOGP15173 224 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 FAM189BP81408 668 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 FAM160A1Q05DH4 1040 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 STRN3Q13033 797 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 COASYQ13057 564 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 SNW1Q13573 536 aaKnown RBP18.54■□□□□ 0.56
RER1-208ENST00000493207 HERC4Q5GLZ8 1057 aaPredicted RBP18.54■□□□□ 0.56
RER1-208ENST00000493207 UBXN11Q5T124 520 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 CNNM4Q6P4Q7 775 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 ECHDC2Q86YB7 292 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 CRIPAKQ8N1N5 446 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 RNF169Q8NCN4 708 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 FIZ1Q96SL8 496 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 MRPL44Q9H9J2 332 aaKnown RBP18.54■□□□□ 0.56
RER1-208ENST00000493207 FAM105AQ9NUU6 356 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 SEL1LQ9UBV2 794 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 MSRAQ9UJ68 235 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 PCDHA11Q9Y5I1 949 aa18.54■□□□□ 0.56
RER1-208ENST00000493207 A0A1B0GUA9 196 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 FNDC1Q4ZHG4 1894 aaPredicted RBP18.53■□□□□ 0.56
RER1-208ENST00000493207 NT5DC1Q5TFE4 455 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 SLC27A1Q6PCB7 646 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 ENGASEQ8NFI3 743 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 CCDC51Q96ER9 411 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 LRCH3Q96II8 777 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 YME1L1Q96TA2 773 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 RAD9AQ99638 391 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 TRAIPQ9BWF2 469 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 EIF2AQ9BY44 585 aaKnown RBP18.53■□□□□ 0.56
RER1-208ENST00000493207 MRPL4Q9BYD3 311 aaKnown RBP18.53■□□□□ 0.56
RER1-208ENST00000493207 PDZD7Q9H5P4 517 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 RNF216Q9NWF9 866 aaPredicted RBP18.53■□□□□ 0.56
RER1-208ENST00000493207 TMEM161AQ9NX61 479 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 YBX2Q9Y2T7 364 aaKnown RBP18.53■□□□□ 0.56
RER1-208ENST00000493207 PCDHB2Q9Y5E7 798 aa18.53■□□□□ 0.56
RER1-208ENST00000493207 N4BP3O15049 544 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 NR1I2O75469 434 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 NPTXRO95502 500 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 PRR29P0C7W0 189 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 SKIP12755 728 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 DNAJB2P25686 324 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 RAB27AP51159 221 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 UBE2HP62256 183 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 RAB30Q15771 203 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 ZC2HC1CQ53FD0 456 aaPredicted RBP18.52■□□□□ 0.56
RER1-208ENST00000493207 ATF7IP2Q5U623 682 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 UNC13DQ70J99 1090 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 SLC17A8Q8NDX2 589 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 GBP4Q96PP9 640 aa18.52■□□□□ 0.56
RER1-208ENST00000493207 NKX2-4Q9H2Z4 354 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms