RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 MOCS3O95396 460 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 SNAI1O95863 264 aaPredicted RBP7.66□□□□□ -1.18
HERC4-211ENST00000492996 ACTN1P12814 892 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 MAGEA1P43355 309 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 HTRA4P83105 476 aaPredicted RBP7.66□□□□□ -1.18
HERC4-211ENST00000492996 RAPGEF1Q13905 1077 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 PLS1Q14651 629 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 Q4G0T1 1027 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 CCDC170Q8IYT3 715 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 CAGE1Q8TC20 777 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 BAP1Q92560 729 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 FAM20AQ96MK3 541 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 MMS19Q96T76 1030 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 TRAIPQ9BWF2 469 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 TEX13BQ9BXU2 312 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 KCTD10Q9H3F6 313 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 ABHD16BQ9H3Z7 469 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 MYO1AQ9UBC5 1043 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 LCMT1Q9UIC8 334 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 VAV3Q9UKW4 847 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 PCDHA13Q9Y5I0 950 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 SAR1BQ9Y6B6 198 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 A6NJR5 290 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 BUB1O43683 1085 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 GAS7O60861 476 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 ZMYND10O75800 440 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 ARP10275 920 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 CXCR5P32302 372 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 SSR1P43307 286 aaKnown RBP7.66□□□□□ -1.18
HERC4-211ENST00000492996 PLA2G4AP47712 749 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 VAV2P52735 878 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 MRPS25P82663 173 aaKnown RBP7.66□□□□□ -1.18
HERC4-211ENST00000492996 AMPD2Q01433 879 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 PPIGQ13427 754 aaKnown RBP eCLIP7.66□□□□□ -1.18
HERC4-211ENST00000492996 TMEM132BQ14DG7 1078 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 FIGNQ5HY92 759 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 MFSD5Q6N075 450 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 CCDC62Q6P9F0 684 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 MOXD1Q6UVY6 613 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 SYT2Q8N9I0 419 aaPredicted RBP7.66□□□□□ -1.18
HERC4-211ENST00000492996 CHURC1Q8WUH1 139 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 CLEC4DQ8WXI8 215 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 SH2D3AQ9BRG2 576 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.66□□□□□ -1.18
HERC4-211ENST00000492996 CXXC1Q9P0U4 656 aaPredicted RBP7.66□□□□□ -1.18
HERC4-211ENST00000492996 SH3BP1Q9Y3L3 701 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 PCDHB13Q9Y5F0 798 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 CAPN6Q9Y6Q1 641 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 NFASCO94856 1347 aa7.66□□□□□ -1.18
HERC4-211ENST00000492996 IGLV3-22A0A075B6J6 115 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 A0A1W2PQJ5 194 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 TNPO2O14787 897 aaKnown RBP7.65□□□□□ -1.18
HERC4-211ENST00000492996 NMT1P30419 496 aaKnown RBP7.65□□□□□ -1.18
HERC4-211ENST00000492996 CASP4P49662 377 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 KCNH2Q12809 1159 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 RAB30Q15771 203 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 WHAMMP3Q1A5X7 153 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 LONRF2Q1L5Z9 754 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 ZC2HC1CQ53FD0 456 aaPredicted RBP7.65□□□□□ -1.18
HERC4-211ENST00000492996 DNAAF5Q86Y56 855 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 TRIM59Q8IWR1 403 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 MYCT1Q8N699 235 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 TBX3O15119 743 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 USO1O60763 962 aaKnown RBP7.65□□□□□ -1.18
HERC4-211ENST00000492996 NOL4O94818 638 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 FAM13AO94988 1023 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 CIITAP33076 1130 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 HOXD13P35453 343 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 MATR3P43243 847 aaKnown RBP eCLIP7.65□□□□□ -1.18
HERC4-211ENST00000492996 VSNL1P62760 191 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 MTMR2Q13614 643 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 KNOP1Q1ED39 458 aaKnown RBP7.65□□□□□ -1.18
HERC4-211ENST00000492996 NBPF20Q3BBV1 942 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 PDXDC1Q6P996 788 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 TMEM184AQ6ZMB5 413 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 GDAP1L1Q96MZ0 367 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 RPAP3Q9H6T3 665 aaPredicted RBP7.65□□□□□ -1.18
HERC4-211ENST00000492996 SMARCAL1Q9NZC9 954 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.65□□□□□ -1.18
HERC4-211ENST00000492996 CCPG1Q9ULG6 757 aa7.65□□□□□ -1.18
HERC4-211ENST00000492996 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.65□□□□□ -1.19
HERC4-211ENST00000492996 NCK2O43639 380 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 SLITRK3O94933 977 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 EFEMP2O95967 443 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 ALAS1P13196 640 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 SLC9A1P19634 815 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 RINT1Q6NUQ1 792 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 TRAPPC11Q7Z392 1133 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 SGSM3Q96HU1 749 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 SLC9A7Q96T83 725 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 TINF2Q9BSI4 451 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 ZNF577Q9BSK1 485 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 ARMCX3Q9UH62 379 aaPredicted RBP7.65□□□□□ -1.19
HERC4-211ENST00000492996 SALL4Q9UJQ4 1053 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 FAM184BQ9ULE4 1060 aa7.65□□□□□ -1.19
HERC4-211ENST00000492996 COLQQ9Y215 455 aaPredicted RBP7.65□□□□□ -1.19
HERC4-211ENST00000492996 RRP15Q9Y3B9 282 aaKnown RBP7.65□□□□□ -1.19
HERC4-211ENST00000492996 PDE2AO00408 941 aaPredicted RBP7.64□□□□□ -1.19
HERC4-211ENST00000492996 NFIBO00712 420 aa7.64□□□□□ -1.19
HERC4-211ENST00000492996 SLC26A4O43511 780 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms