RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 GOLGA6CA6NDK9 693 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 RPS6KA5O75582 802 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 LYPLA2O95372 231 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 GOLGA6DP0CG33 693 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 ANXA13P27216 316 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 ADSSP30520 456 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 HMGCS2P54868 508 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 PSMC5P62195 406 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 GTF2BQ00403 316 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 BSNDQ8WZ55 320 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 PBKQ96KB5 322 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 DDX47Q9H0S4 455 aaKnown RBP13.92□□□□□ -0.18
PRAME-213ENST00000492657 GOLGA6AQ9NYA3 693 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 TCEAL9Q9UHQ7 104 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 DOCK5Q9H7D0 1870 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 MAP2K1Q02750 393 aaPredicted RBP13.92□□□□□ -0.18
PRAME-213ENST00000492657 SF3B2Q13435 895 aaKnown RBP13.92□□□□□ -0.18
PRAME-213ENST00000492657 EMBQ6PCB8 327 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 INTS8Q75QN2 995 aaKnown RBP13.92□□□□□ -0.18
PRAME-213ENST00000492657 C4orf19Q8IY42 314 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 FAM76AQ8TAV0 307 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 ARL8AQ96BM9 186 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 TMEM117Q9H0C3 514 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 COG5Q9UP83 839 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 NOC2LQ9Y3T9 749 aaKnown RBP13.92□□□□□ -0.18
PRAME-213ENST00000492657 NR2E1Q9Y466 385 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 KIAA1217Q5T5P2 1943 aa13.92□□□□□ -0.18
PRAME-213ENST00000492657 WDR64B1ANS9 1081 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 ZNF862O60290 1169 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 NR3C2P08235 984 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 BACE1P56817 501 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 ERVK-9P63128 1117 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 EPC2Q52LR7 807 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 SNRNP48Q6IEG0 339 aaKnown RBP13.91□□□□□ -0.18
PRAME-213ENST00000492657 SEMA4DQ92854 862 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 AGPAT1Q99943 283 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 TOPORSQ9NS56 1045 aaPredicted RBP13.91□□□□□ -0.18
PRAME-213ENST00000492657 INTUQ9ULD6 942 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 A0A0A6YYK5 440 aaPredicted RBP13.91□□□□□ -0.18
PRAME-213ENST00000492657 PEX10O60683 326 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 RGS20O76081 388 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 TNFRSF8P28908 595 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 MYBPC2Q14324 1141 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 KIF22Q14807 665 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 NAA35Q5VZE5 725 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 ADAT2Q7Z6V5 191 aaKnown RBP13.91□□□□□ -0.18
PRAME-213ENST00000492657 VSIG10LQ86VR7 867 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 ACTRT1Q8TDG2 376 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 RUBCNQ92622 972 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 CAVIN3Q969G5 261 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 WRNIP1Q96S55 665 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 SUCLA2Q9P2R7 463 aaPredicted RBP13.91□□□□□ -0.18
PRAME-213ENST00000492657 GABBR1Q9UBS5 961 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 USP20Q9Y2K6 914 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 SGPL1O95470 568 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 TMEM253P0C7T8 217 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 MAPTP10636 758 aaKnown RBP13.91□□□□□ -0.18
PRAME-213ENST00000492657 NPTX2P47972 431 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 TNNC1P63316 161 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 TMEM161BQ8NDZ6 487 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 LMBR1Q8WVP7 490 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 CTNNBL1Q8WYA6 563 aaPredicted RBP13.91□□□□□ -0.18
PRAME-213ENST00000492657 RFFLQ8WZ73 363 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 ZIM3Q96PE6 472 aa13.91□□□□□ -0.18
PRAME-213ENST00000492657 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.91□□□□□ -0.189e-22■□□□□ 9.7
PRAME-213ENST00000492657 WDR81Q562E7 1941 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 COL11A1P12107 1806 aaPredicted RBP13.9□□□□□ -0.18
PRAME-213ENST00000492657 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
PRAME-213ENST00000492657 KRIT1O00522 736 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 PTPRAP18433 802 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 NCKAP1LP55160 1127 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 TGFB2P61812 414 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 PPATQ06203 517 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 PRKG1Q13976 671 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 NLRX1Q86UT6 975 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 RPUSD2Q8IZ73 545 aaKnown RBP13.9□□□□□ -0.18
PRAME-213ENST00000492657 SLC16A10Q8TF71 515 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 HES6Q96HZ4 224 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 MOV10L1Q9BXT6 1211 aaKnown RBP13.9□□□□□ -0.18
PRAME-213ENST00000492657 AMFRQ9UKV5 643 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 TBX20Q9UMR3 447 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 NCANO14594 1321 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 DENND3A2RUS2 1198 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 SART1O43290 800 aaKnown RBP13.9□□□□□ -0.18
PRAME-213ENST00000492657 FTLP02792 175 aaPredicted RBP13.9□□□□□ -0.18
PRAME-213ENST00000492657 COPB2P35606 906 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 MXI1P50539 228 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 KRT76Q01546 638 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 PAK2Q13177 524 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 DCAF12L1Q5VU92 463 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 SWSAP1Q6NVH7 229 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 C12orf56Q8IXR9 622 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 REPS2Q8NFH8 660 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 CEP170P1Q96L14 293 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 KREMEN1Q96MU8 473 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 PCDHB18PQ96TA0 734 aa13.9□□□□□ -0.18
PRAME-213ENST00000492657 CES2O00748 559 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 PPFIA4O75335 1185 aa13.89□□□□□ -0.19
PRAME-213ENST00000492657 CALCAP01258 141 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms