RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 MYOTQ9UBF9 498 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 ZC3H7BQ9UGR2 993 aaKnown RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 LRCH1Q9Y2L9 728 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 PAPPA2Q9BXP8 1791 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 DOT1LQ8TEK3 1739 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 ZNF561-AS1K7EIQ3 104 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 ENPP1P22413 925 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 RTP1P59025 263 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 AOC3Q16853 763 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 NKPD1Q17RQ9 610 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 PAN2Q504Q3 1202 aaKnown RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 MORC1Q86VD1 984 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 IFNL2Q8IZJ0 200 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 PNISRQ8TF01 805 aaKnown RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 IL17RAQ96F46 866 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 NLRC4Q9NPP4 1024 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 SYNPO2Q9UMS6 1093 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 EDARQ9UNE0 448 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 FAM205AQ6ZU69 1335 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 AFDNP55196 1824 aaKnown RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 MYL3P08590 195 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 BTKQ06187 659 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 C4orf46Q504U0 113 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 THEMIS2Q5TEJ8 643 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 KCTD1Q719H9 257 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 EPM2AIP1Q7L775 607 aaPredicted RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 RIOX2Q8IUF8 465 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 STK11IPQ8N1F8 1099 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 RSAD2Q8WXG1 361 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 C1GALT1C1Q96EU7 318 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 LTV1Q96GA3 475 aaPredicted RBP3.7□□□□□ -1.82
SNX13-209ENST00000492626 MAP6Q96JE9 813 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 GBP4Q96PP9 640 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 PRRX2Q99811 253 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 SMURF1Q9HCE7 757 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 ATP13A1Q9HD20 1204 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 PDLIM7Q9NR12 457 aa3.7□□□□□ -1.82
SNX13-209ENST00000492626 METP08581 1390 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 PMM2O15305 246 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 TCEA3O75764 348 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 ASGR2P07307 311 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 LPOP22079 712 aaPredicted RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 ADMP35318 185 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 OXCT1P55809 520 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 FAM193AP78312 1265 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 SRSF2Q01130 221 aaKnown RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 TEKQ02763 1124 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 CT83Q5H943 113 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 ANGEL2Q5VTE6 544 aaKnown RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 CYP4F22Q6NT55 531 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 DENND1CQ8IV53 801 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 SPACA3Q8IXA5 215 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 CBARPQ8N350 705 aaPredicted RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 ANKS4BQ8N8V4 417 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 ANKRD42Q8N9B4 389 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 SLC35G2Q8TBE7 412 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 SEC14L1Q92503 715 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 CCT6BQ92526 530 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 RTF1Q92541 710 aaKnown RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 PAWRQ96IZ0 340 aaKnown RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 ADI1Q9BV57 179 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 SLAMF8Q9P0V8 285 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 CNTNAP5Q8WYK1 1306 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 CNTNAP4Q9C0A0 1308 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 COL5A3P25940 1745 aaPredicted RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 DDX60Q8IY21 1712 aaKnown RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 F5H423 210 aaPredicted RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 NRP2O60462 931 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 F13BP05160 661 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 HOXB4P17483 251 aaPredicted RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 EIF5P55010 431 aaKnown RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 NRG3P56975 720 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 SMAD3P84022 425 aaKnown RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 CHAF1AQ13111 956 aaPredicted RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 STK3Q13188 491 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 GRM1Q13255 1194 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 TUSC3Q13454 348 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 SMAD2Q15796 467 aaKnown RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 FBXO46Q6PJ61 603 aaPredicted RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 CPXCR1Q8N123 301 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 LMBR1Q8WVP7 490 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 DNM3Q9UQ16 869 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 B3GALT1Q9Y5Z6 326 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 CDHR2Q9BYE9 1310 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 TJP1Q07157 1748 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 CCDC189A1A4V9 331 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 MAN2B1O00754 1011 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 ARHGEF15O94989 841 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 PTPN1P18031 435 aaKnown RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 KIR2DL1P43626 348 aaPredicted RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 KIR2DL2P43627 348 aaPredicted RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 BIRC3Q13489 604 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 LONRF1Q17RB8 773 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 INAVAQ3KP66 663 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 WDR78Q5VTH9 848 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 DAAM2Q86T65 1068 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 MISP3Q96FF7 219 aa3.69□□□□□ -1.82
SNX13-209ENST00000492626 ACE2Q9BYF1 805 aaPredicted RBP3.69□□□□□ -1.82
SNX13-209ENST00000492626 DMTF1Q9Y222 760 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms