RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 MRPL10Q7Z7H8 261 aaKnown RBP19.21■□□□□ 0.67
SGMS1-204ENST00000492601 ZNF280BQ86YH2 543 aa19.21■□□□□ 0.67
SGMS1-204ENST00000492601 VPS52Q8N1B4 723 aa19.21■□□□□ 0.67
SGMS1-204ENST00000492601 MRPL43Q8N983 215 aaKnown RBP19.21■□□□□ 0.67
SGMS1-204ENST00000492601 URGCPQ8TCY9 931 aa19.21■□□□□ 0.67
SGMS1-204ENST00000492601 ASAP3Q8TDY4 903 aa19.21■□□□□ 0.67
SGMS1-204ENST00000492601 AUTS2Q8WXX7 1259 aa19.21■□□□□ 0.67
SGMS1-204ENST00000492601 ZNF318Q5VUA4 2279 aa19.21■□□□□ 0.67
SGMS1-204ENST00000492601 INO80B-WBP1J3KQ70 363 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 DGAT1O75907 488 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 CXCL14O95715 111 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 GALTP07902 379 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 RARRES1P49788 294 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 PTENP60484 403 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 SYCE2Q6PIF2 218 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 TMEM184AQ6ZMB5 413 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 BCL7CQ8WUZ0 217 aaPredicted RBP19.2■□□□□ 0.66
SGMS1-204ENST00000492601 RSPH1Q8WYR4 309 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 SUSD6Q92537 303 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 IGSF21Q96ID5 467 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 CPB2Q96IY4 423 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 RPGRIP1Q96KN7 1286 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 LLPHQ9BRT6 129 aaKnown RBP19.2■□□□□ 0.66
SGMS1-204ENST00000492601 PHF7Q9BWX1 381 aaPredicted RBP19.2■□□□□ 0.66
SGMS1-204ENST00000492601 ZBP1Q9H171 429 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 S1PR5Q9H228 398 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 RSAD1Q9HA92 442 aa19.2■□□□□ 0.66
SGMS1-204ENST00000492601 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.19■□□□□ 0.66
SGMS1-204ENST00000492601 TSPAN1O60635 241 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 CLASP2O75122 1294 aaKnown RBP19.19■□□□□ 0.66
SGMS1-204ENST00000492601 SPATA31C1P0DKV0 1188 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 SLC11A1P49279 550 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 CAPSQ13938 189 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 TFDP1Q14186 410 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 BMS1Q14692 1282 aaKnown RBP19.19■□□□□ 0.66
SGMS1-204ENST00000492601 ZNF174Q15697 407 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 MAEAQ7L5Y9 396 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 FAM122AQ96E09 287 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 EIF2AQ9BY44 585 aaKnown RBP19.19■□□□□ 0.66
SGMS1-204ENST00000492601 HCFC2Q9Y5Z7 792 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 CNTNAP2Q9UHC6 1331 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 TRIP11Q15643 1979 aa19.19■□□□□ 0.66
SGMS1-204ENST00000492601 LOC730098B7Z3J9 87 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 USO1O60763 962 aaKnown RBP19.18■□□□□ 0.66
SGMS1-204ENST00000492601 DDHD2O94830 711 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 POMCP01189 267 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 NCLP19338 710 aaKnown RBP19.18■□□□□ 0.66
SGMS1-204ENST00000492601 GLRA2P23416 452 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 ARL2P36404 184 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 PLA2G5P39877 138 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 CBX2Q14781 532 aaPredicted RBP19.18■□□□□ 0.66
SGMS1-204ENST00000492601 HERC4Q5GLZ8 1057 aaPredicted RBP19.18■□□□□ 0.66
SGMS1-204ENST00000492601 DDX53Q86TM3 631 aaKnown RBP19.18■□□□□ 0.66
SGMS1-204ENST00000492601 TMEM87AQ8NBN3 555 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 SMG8Q8ND04 991 aaKnown RBP19.18■□□□□ 0.66
SGMS1-204ENST00000492601 CASP10Q92851 521 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 FAM193BQ96PV7 902 aaPredicted RBP19.18■□□□□ 0.66
SGMS1-204ENST00000492601 KIF2CQ99661 725 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 POLR3FQ9H1D9 316 aaPredicted RBP19.18■□□□□ 0.66
SGMS1-204ENST00000492601 CDH22Q9UJ99 828 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 IPPQ9Y573 584 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 C2orf16Q68DN1 1984 aa19.18■□□□□ 0.66
SGMS1-204ENST00000492601 WDFY4Q6ZS81 3184 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 ZDBF2Q9HCK1 2354 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 MED24O75448 989 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 ITGA4P13612 1032 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 SP100P23497 879 aaPredicted RBP19.17■□□□□ 0.66
SGMS1-204ENST00000492601 MBTD1Q05BQ5 628 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 GNL2Q13823 731 aaKnown RBP19.17■□□□□ 0.66
SGMS1-204ENST00000492601 C8orf34Q49A92 452 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 NOTUMQ6P988 496 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 CATSPER3Q86XQ3 398 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 IFNLR1Q8IU57 520 aaPredicted RBP19.17■□□□□ 0.66
SGMS1-204ENST00000492601 FAM184AQ8NB25 1140 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 ZSCAN31Q96LW9 406 aaPredicted RBP19.17■□□□□ 0.66
SGMS1-204ENST00000492601 APOL6Q9BWW8 343 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 VN1R3Q9BXE9 311 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 RNF39Q9H2S5 420 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 FOXP1Q9H334 677 aaPredicted RBP19.17■□□□□ 0.66
SGMS1-204ENST00000492601 GPRC5CQ9NQ84 441 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 HES2Q9Y543 173 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 PLXNA3P51805 1871 aa19.17■□□□□ 0.66
SGMS1-204ENST00000492601 CARNS1A5YM72 827 aa19.16■□□□□ 0.66
SGMS1-204ENST00000492601 SSBP05455 408 aaKnown RBP eCLIP19.16■□□□□ 0.66
SGMS1-204ENST00000492601 OR52Z1P0C646 297 aa19.16■□□□□ 0.66
SGMS1-204ENST00000492601 CTSAP10619 480 aa19.16■□□□□ 0.66
SGMS1-204ENST00000492601 XRCC6P12956 609 aaKnown RBP eCLIP19.16■□□□□ 0.66
SGMS1-204ENST00000492601 HOXB8P17481 243 aaPredicted RBP19.16■□□□□ 0.66
SGMS1-204ENST00000492601 ARF4P18085 180 aaPredicted RBP19.16■□□□□ 0.66
SGMS1-204ENST00000492601 AXLP30530 894 aa19.16■□□□□ 0.66
SGMS1-204ENST00000492601 POU5F1BQ06416 359 aa19.16■□□□□ 0.66
SGMS1-204ENST00000492601 NCBP1Q09161 790 aaKnown RBP19.16■□□□□ 0.66
SGMS1-204ENST00000492601 PCBP1Q15365 356 aaKnown RBP eCLIP19.16■□□□□ 0.66
SGMS1-204ENST00000492601 AMHR2Q16671 573 aa19.16■□□□□ 0.66
SGMS1-204ENST00000492601 CDR2LQ86X02 465 aaPredicted RBP19.16■□□□□ 0.66
SGMS1-204ENST00000492601 CNNM3Q8NE01 707 aa19.16■□□□□ 0.66
SGMS1-204ENST00000492601 FBXO18Q8NFZ0 1043 aa19.16■□□□□ 0.66
SGMS1-204ENST00000492601 CSRNP2Q9H175 543 aa19.16■□□□□ 0.66
SGMS1-204ENST00000492601 TUFT1Q9NNX1 390 aa19.16■□□□□ 0.66
SGMS1-204ENST00000492601 KANSL3Q9P2N6 904 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms