RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 SLC26A4O43511 780 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 GTPBP6O43824 516 aaPredicted RBP7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 B4GALT3O60512 393 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 F13A1P00488 732 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 ITGB1P05556 798 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 PLCG1P19174 1290 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 NCLP19338 710 aaKnown RBP7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 GUCY2CP25092 1073 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 AXLP30530 894 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 UBA7P41226 1012 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 NAMPTP43490 491 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 NPTX2P47972 431 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 MRPS5P82675 430 aaKnown RBP7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 PCBP1Q15365 356 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 FAM187BQ17R55 369 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 NAALADL2Q58DX5 795 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 NT5DC1Q5TFE4 455 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 PPP4R3CPQ6ZMV5 832 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 TAS1R3Q7RTX0 852 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 MICALL1Q8N3F8 863 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 SPPL3Q8TCT6 385 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 KIFAP3Q92845 792 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 P2RX5Q93086 422 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 MRPL38Q96DV4 380 aaKnown RBP7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 FAM122AQ96E09 287 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 NTPCRQ9BSD7 190 aaKnown RBP7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 PLVAPQ9BX97 442 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 NT5C3AQ9H0P0 336 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 ALG13Q9NP73 1137 aaKnown RBP7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 RNF216Q9NWF9 866 aaPredicted RBP7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 MIOSQ9NXC5 875 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 IPPQ9Y573 584 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 LOXHD1Q8IVV2 1947 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 MUC3AQ02505 3323 aa7.95□□□□□ -1.14
PDLIM1-204ENST00000492511 ARID2Q68CP9 1835 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 ACKR2O00590 384 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 HOXA2O43364 376 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 ERLIN2O94905 339 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 BRD1O95696 1058 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 HSP90AA1P07900 732 aaKnown RBP7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 SKIP12755 728 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 IRS1P35568 1242 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 DDIT3P35638 169 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 PBX3P40426 434 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 RAB27AP51159 221 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 PEX3P56589 373 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 CACNB1Q02641 598 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 RAD51AP2Q09MP3 1159 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 MCM6Q14566 821 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 AAK1Q2M2I8 961 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 FOXD4L6Q3SYB3 417 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 EEF1DP3Q658K8 133 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 NOTUMQ6P988 496 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 FOXD4L3Q6VB84 417 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 COLGALT1Q8NBJ5 622 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 RAD54LQ92698 747 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 CCDC51Q96ER9 411 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 CALML4Q96GE6 196 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 CDK5RAP3Q96JB5 506 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 CHAMP1Q96JM3 812 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 IFT74Q96LB3 600 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 UHRF1Q96T88 793 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 C11orf84Q9BUA3 381 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 C2orf40Q9H1Z8 148 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 CXCL16Q9H2A7 254 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 NXF3Q9H4D5 531 aaKnown RBP7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 PDZD7Q9H5P4 517 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 TBC1D13Q9NVG8 400 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 PRMT7Q9NVM4 692 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 ARHGAP28Q9P2N2 729 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 RWDD3Q9Y3V2 267 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 HES2Q9Y543 173 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 CNTNAP2Q9UHC6 1331 aa7.94□□□□□ -1.14
PDLIM1-204ENST00000492511 CCDC169A6NNP5 214 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 SPTLC2O15270 562 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 INPPL1O15357 1258 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 PPP6R2O75170 966 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 FGF18O76093 207 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 DDHD2O94830 711 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 NPTXRO95502 500 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 SSBP05455 408 aaKnown RBP eCLIP7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 PRKCBP05771 671 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 PDIA4P13667 645 aaKnown RBP7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 PLS3P13797 630 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 AKAP5P24588 427 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 PLA2G5P39877 138 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 EFNA5P52803 228 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 ERVFC1P60507 584 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 PRPF4BQ13523 1007 aaKnown RBP7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 GIT2Q14161 759 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 DHX8Q14562 1220 aaKnown RBP7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 PPP2R5AQ15172 486 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 MAPK6Q16659 721 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 NOMO2Q5JPE7 1267 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 AXDND1Q5T1B0 1012 aaPredicted RBP7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 SLC27A1Q6PCB7 646 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 KCNT2Q6UVM3 1135 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 TMEM173Q86WV6 379 aaPredicted RBP7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 ZNF280BQ86YH2 543 aa7.93□□□□□ -1.14
PDLIM1-204ENST00000492511 ZBTB8OSQ8IWT0 167 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms