RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SLC47A2Q86VL8 602 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 RPUSD2Q8IZ73 545 aaKnown RBP13.48□□□□□ -0.25
HMGN1-220ENST00000492280 KRT35Q92764 455 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 WRNIP1Q96S55 665 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 SYT11Q9BT88 431 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 MKNK1Q9BUB5 465 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 GABBR1Q9UBS5 961 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 CYP26A1O43174 497 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 DAPK3O43293 454 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 HSF2BPO75031 334 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 MXI1P50539 228 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 TNNC1P63316 161 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 FSTL1Q12841 308 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 LLGL2Q6P1M3 1020 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 EMBQ6PCB8 327 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 MSL3Q8N5Y2 521 aaKnown RBP13.48□□□□□ -0.25
HMGN1-220ENST00000492280 ZNF526Q8TF50 670 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-220ENST00000492280 PCDHB18PQ96TA0 734 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 FBXL5Q9UKA1 691 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 DENND3A2RUS2 1198 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 VWA5AO00534 786 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 CLSTN1O94985 981 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 PDCLQ13371 301 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 FKBP1CQ5VVH2 108 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 CYFIP1Q7L576 1253 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 MAATS1Q7Z4T9 603 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 XXYLT1Q8NBI6 393 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 PIK3R5Q8WYR1 880 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 KREMEN1Q96MU8 473 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 ACCSQ96QU6 501 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 KIAA1683Q9H0B3 1180 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 PSD3Q9NYI0 1048 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 CTTNBP2NLQ9P2B4 639 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 TMEM59LQ9UK28 342 aa13.48□□□□□ -0.25
HMGN1-220ENST00000492280 PFASO15067 1338 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 PLA2G6O60733 806 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 RGS20O76081 388 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 NPTX2P47972 431 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 PAK2Q13177 524 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 SNRNP35Q16560 246 aaKnown RBP13.47□□□□□ -0.25
HMGN1-220ENST00000492280 DAB2IPQ5VWQ8 1189 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 NOP9Q86U38 636 aaKnown RBP13.47□□□□□ -0.25
HMGN1-220ENST00000492280 GOLGA5Q8TBA6 731 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 RFFLQ8WZ73 363 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 GLG1Q92896 1179 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.47□□□□□ -0.254e-7■■■□□ 15.1
HMGN1-220ENST00000492280 STXBP5LQ9Y2K9 1186 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 FTLP02792 175 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-220ENST00000492280 MMEP08473 750 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 BCRP11274 1271 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 PPP2R5AQ15172 486 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 DALRD3Q5D0E6 543 aaKnown RBP13.47□□□□□ -0.25
HMGN1-220ENST00000492280 CFAP58Q5T655 872 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 SLC39A4Q6P5W5 647 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 MCF2L2Q86YR7 1114 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 MTMR14Q8NCE2 650 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 TAS1R2Q8TE23 839 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 SCFD2Q8WU76 684 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 CEP170P1Q96L14 293 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 AGPAT1Q99943 283 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 AMFRQ9UKV5 643 aa13.47□□□□□ -0.25
HMGN1-220ENST00000492280 UBE4BO95155 1302 aa13.46□□□□□ -0.25
HMGN1-220ENST00000492280 MESDQ14696 234 aa13.46□□□□□ -0.25
HMGN1-220ENST00000492280 SWSAP1Q6NVH7 229 aa13.46□□□□□ -0.25
HMGN1-220ENST00000492280 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
HMGN1-220ENST00000492280 KCND2Q9NZV8 630 aa13.46□□□□□ -0.25
HMGN1-220ENST00000492280 SEPT9Q9UHD8 586 aaPredicted RBP13.46□□□□□ -0.25
HMGN1-220ENST00000492280 CNOT7Q9UIV1 285 aaKnown RBP13.46□□□□□ -0.25
HMGN1-220ENST00000492280 LOXHD1Q8IVV2 1947 aa13.46□□□□□ -0.25
HMGN1-220ENST00000492280 BTNL10A8MVZ5 291 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 DDX3YO15523 660 aaKnown RBP13.46□□□□□ -0.26
HMGN1-220ENST00000492280 NR3C2P08235 984 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 LMNB1P20700 586 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 HPDP32754 393 aaPredicted RBP13.46□□□□□ -0.26
HMGN1-220ENST00000492280 WNT7BP56706 349 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 C10orf76Q5T2E6 689 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 UBAP2Q5T6F2 1119 aaKnown RBP13.46□□□□□ -0.26
HMGN1-220ENST00000492280 ANGEL2Q5VTE6 544 aaKnown RBP13.46□□□□□ -0.26
HMGN1-220ENST00000492280 SCARA3Q6AZY7 606 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 INTS8Q75QN2 995 aaKnown RBP13.46□□□□□ -0.26
HMGN1-220ENST00000492280 SLFN11Q7Z7L1 901 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 TMEM161BQ8NDZ6 487 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 LPAR1Q92633 364 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 CAVIN3Q969G5 261 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 HES6Q96HZ4 224 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 RNPC3Q96LT9 517 aaKnown RBP13.46□□□□□ -0.26
HMGN1-220ENST00000492280 PLAAQ9Y263 795 aa13.46□□□□□ -0.26
HMGN1-220ENST00000492280 POLR2AP24928 1970 aaKnown RBP13.45□□□□□ -0.26
HMGN1-220ENST00000492280 MYH9P35579 1960 aaKnown RBP13.45□□□□□ -0.26
HMGN1-220ENST00000492280 WDR64B1ANS9 1081 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 CNGA1P29973 690 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 PSMC5P62195 406 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 GNGT1P63211 74 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 NNTQ13423 1086 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 UAP1Q16222 522 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-220ENST00000492280 IFI16Q16666 785 aaKnown RBP13.45□□□□□ -0.26
HMGN1-220ENST00000492280 SEZ6Q53EL9 994 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 TRPM4Q8TD43 1214 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 ACTRT1Q8TDG2 376 aa13.45□□□□□ -0.26
HMGN1-220ENST00000492280 TATDN2Q93075 761 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms