RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 BCAR1P56945 870 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 MBTD1Q05BQ5 628 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 SMAD2Q15796 467 aaKnown RBP14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 ECM1Q16610 540 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 DUSP6Q16828 381 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 POTEGQ6S5H5 508 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 GJD3Q8N144 294 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 SMG8Q8ND04 991 aaKnown RBP14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 MICAL1Q8TDZ2 1067 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 POLR3CQ9BUI4 534 aaPredicted RBP14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 GPRC5CQ9NQ84 441 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 SPG21Q9NZD8 308 aa14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 BARX2Q9UMQ3 279 aaPredicted RBP14.11□□□□□ -0.15
SEC61A1-206ENST00000491668 EYA4O95677 639 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 TRAPPC10P48553 1259 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 RAB27AP51159 221 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 POU5F1BQ06416 359 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 ORC2Q13416 577 aaPredicted RBP14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 MXD4Q14582 209 aaPredicted RBP14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 IL17AQ16552 155 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 NOMO2Q5JPE7 1267 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 PLPP4Q5VZY2 271 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 ZNF280BQ86YH2 543 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 IPO9Q96P70 1041 aaKnown RBP14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 TCF25Q9BQ70 676 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 VN1R3Q9BXE9 311 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 EIF2AQ9BY44 585 aaKnown RBP14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 MRPL9Q9BYD2 267 aaKnown RBP14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 POLR3FQ9H1D9 316 aaPredicted RBP14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 NRDE2Q9H7Z3 1164 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 TUFT1Q9NNX1 390 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 DNAJB4Q9UDY4 337 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 RAPGEFL1Q9UHV5 662 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 CD207Q9UJ71 328 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 DBR1Q9UK59 544 aaKnown RBP14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 PCDHB6Q9Y5E3 794 aa14.1□□□□□ -0.15
SEC61A1-206ENST00000491668 B4GALT5O43286 388 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 USO1O60763 962 aaKnown RBP14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 DDHD2O94830 711 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 GALTP07902 379 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 SKIP12755 728 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 RPA1P27694 616 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 PPM1AP35813 382 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 NDUFV1P49821 464 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 COASYQ13057 564 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 SMAD4Q13485 552 aaKnown RBP14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 PDE12Q6L8Q7 609 aaKnown RBP14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 GLB1LQ6UWU2 654 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 MAEAQ7L5Y9 396 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 ADHFE1Q8IWW8 467 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 SMRP1Q8NCR6 262 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 BSNDQ8WZ55 320 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 CPB2Q96IY4 423 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 NFKBIZQ9BYH8 718 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 INPP5FQ9Y2H2 1132 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 HES2Q9Y543 173 aa14.09□□□□□ -0.15
SEC61A1-206ENST00000491668 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 PI4K2BG5E9Z4 385 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 INO80B-WBP1J3KQ70 363 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 ARF4P18085 180 aaPredicted RBP14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 NCLP19338 710 aaKnown RBP14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 SLC11A1P49279 550 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 PTGDRQ13258 359 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 FOXD4L5Q5VV16 416 aaPredicted RBP14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 TMEM184AQ6ZMB5 413 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 MRPL43Q8N983 215 aaKnown RBP14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 FOXD4L4Q8WXT5 416 aaPredicted RBP14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 PPP2R3CQ969Q6 453 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 NACC1Q96RE7 527 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 ENTPD7Q9NQZ7 604 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 PRKAG3Q9UGI9 489 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 PUF60Q9UHX1 559 aaKnown RBP14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 NOL7Q9UMY1 257 aaKnown RBP14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 IPPQ9Y573 584 aa14.08□□□□□ -0.16
SEC61A1-206ENST00000491668 C2orf71A6NGG8 1288 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 PP2D1A8MPX8 630 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 INPPL1O15357 1258 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 ERLIN2O94905 339 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 EDN1P05305 212 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 SSTR3P32745 418 aaPredicted RBP14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 ALDH7A1P49419 539 aaKnown RBP14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 KRT17Q04695 432 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 TFDP1Q14186 410 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 PCBP1Q15365 356 aaKnown RBP eCLIP14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 SYCE2Q6PIF2 218 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 PADI6Q6TGC4 694 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 CDR2LQ86X02 465 aaPredicted RBP14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 IGSF22Q8N9C0 903 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 AUTS2Q8WXX7 1259 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 RSPH1Q8WYR4 309 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 PGBD4Q96DM1 585 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 IGSF21Q96ID5 467 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 CDCA3Q99618 268 aaPredicted RBP14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 CSRNP2Q9H175 543 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 S1PR5Q9H228 398 aa14.07□□□□□ -0.16
SEC61A1-206ENST00000491668 RSAD1Q9HA92 442 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms