RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 PGBD1Q96JS3 809 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 FAM193BQ96PV7 902 aaPredicted RBP12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 NRDE2Q9H7Z3 1164 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 WDR6Q9NNW5 1121 aaKnown RBP12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 TBC1D13Q9NVG8 400 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 KANSL3Q9P2N6 904 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 IGLV3-22A0A075B6J6 115 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 KRBA1A5PL33 1030 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 FAM86B1E9PN63 330 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 SGSM2O43147 1006 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 NARSO43776 548 aaKnown RBP12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 ZNF623O75123 536 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 OATP04181 439 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 ALDH2P05091 517 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 URODP06132 367 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 FAM86B2P0C5J1 330 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 ZNF528Q3MIS6 628 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 SOWAHCQ53LP3 525 aaPredicted RBP12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 SPECC1Q5M775 1068 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 CENPQQ7L2Z9 268 aaPredicted RBP12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 ZNF410Q86VK4 478 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 SGMS1Q86VZ5 419 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 TMEM173Q86WV6 379 aaPredicted RBP12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 MICU3Q86XE3 530 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 SLC44A3Q8N4M1 653 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 ATRIPQ8WXE1 791 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 TMEM175Q9BSA9 504 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 BARHL2Q9NY43 387 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 CA14Q9ULX7 337 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 PCDHGA2Q9Y5H1 932 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 RBM8AQ9Y5S9 174 aaKnown RBP12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 TAF6LQ9Y6J9 622 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 ZFP37Q9Y6Q3 630 aaPredicted RBP12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 DSPP15924 2871 aaKnown RBP12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 NBEAQ8NFP9 2946 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 CLUHO75153 1309 aa12.56□□□□□ -0.4
CLCNKA-206ENST00000491433 CCDC195A0A1B0GUA6 201 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 CNPP09543 421 aaKnown RBP12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 SFNP31947 248 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 MAGEA9P43362 315 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 CCDC12Q8WUD4 166 aaPredicted RBP12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 GBP3Q9H0R5 595 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 EPC1Q9H2F5 836 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 PARD6AQ9NPB6 346 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 MAN1C1Q9NR34 630 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 ARHGEF3Q9NR81 526 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 FAM105AQ9NUU6 356 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 PIN4Q9Y237 131 aaKnown RBP12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 INPP5FQ9Y2H2 1132 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 FAN1Q9Y2M0 1017 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 CNTNAP5Q8WYK1 1306 aa12.55□□□□□ -0.4
CLCNKA-206ENST00000491433 MIA3Q5JRA6 1907 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 MTCL1Q9Y4B5 1905 aaKnown RBP12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 EIF4E1BA6NMX2 242 aaKnown RBP12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 INPPL1O15357 1258 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 OFD1O75665 1012 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 GLUD1P00367 558 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 SOD2P04179 222 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 SLC11A1P49279 550 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 JAK3P52333 1124 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 IL31Q6EBC2 164 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 JPH2Q9BR39 696 aaPredicted RBP12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 PLEKHA4Q9H4M7 779 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 PIDD1Q9HB75 910 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 SLC2A4RGQ9NR83 387 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 DISC1Q9NRI5 854 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 DLGAP2Q9P1A6 1054 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 FBXO4Q9UKT5 387 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 CNTNAP2Q9UHC6 1331 aa12.54□□□□□ -0.4
CLCNKA-206ENST00000491433 TBC1D4O60343 1298 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 LILRB3O75022 631 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 NR1I2O75469 434 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 SSBP05455 408 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 DCNP07585 359 aaKnown RBP12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 GSPT1P15170 499 aaKnown RBP12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 FGFR4P22455 802 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 AK2P54819 239 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 PRKCEQ02156 737 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 JAKMIP3Q5VZ66 844 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 TYW1BQ6NUM6 668 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 CATSPER4Q7RTX7 472 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 PJA1Q8NG27 643 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 GPR152Q8TDT2 470 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 BCL7CQ8WUZ0 217 aaPredicted RBP12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 CRYGNQ8WXF5 182 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 RSAD2Q8WXG1 361 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 SMG7Q92540 1137 aaKnown RBP12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 LPPQ93052 612 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 PHKBQ93100 1093 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 ZNF668Q96K58 619 aaPredicted RBP12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 RPS6KC1Q96S38 1066 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 HERC2P3Q9BVR0 1158 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 BCO2Q9BYV7 579 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 C6orf50Q9HD87 102 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 UBN1Q9NPG3 1134 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 ZDHHC7Q9NXF8 308 aa12.53□□□□□ -0.4
CLCNKA-206ENST00000491433 DNAJB4Q9UDY4 337 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms