RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 FAM20AQ96MK3 541 aa9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 KLHL5Q96PQ7 755 aa9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 EMILIN2Q9BXX0 1053 aa9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 DHX33Q9H6R0 707 aaKnown RBP9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 ZSWIM6Q9HCJ5 1215 aa9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 KCNMB3Q9NPA1 279 aa9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 FAM86C1Q9NVL1 165 aa9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 DNAJB4Q9UDY4 337 aa9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 LIMD1Q9UGP4 676 aa9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 SEPT9Q9UHD8 586 aaPredicted RBP9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 DBR1Q9UK59 544 aaKnown RBP9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 PCDHB2Q9Y5E7 798 aa9.47□□□□□ -0.89
APOBEC3F-204ENST00000491387 TMEM150BA6NC51 233 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 PRR23AA6NEV1 266 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 DDX11L8A8MPP1 907 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 EML1O00423 815 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 TBX3O15119 743 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 ASAP2O43150 1006 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 GAS2O43903 313 aaKnown RBP9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 DKC1O60832 514 aaKnown RBP eCLIP9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 DDHD2O94830 711 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 DEXIO95424 95 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 ASGR2P07307 311 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 CNPP09543 421 aaKnown RBP9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 WEE2P0C1S8 567 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 NPR3P17342 541 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 NCLP19338 710 aaKnown RBP9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 AOC1P19801 751 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 QARSP47897 775 aaKnown RBP9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 RNASELQ05823 741 aaKnown RBP9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 POU5F1BQ06416 359 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 NONOQ15233 471 aaKnown RBP eCLIP9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 PPP4R3AQ6IN85 833 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 KANK3Q6NY19 840 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 RHPN2Q8IUC4 686 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 GPR65Q8IYL9 337 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 TMEM87AQ8NBN3 555 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 CNNM3Q8NE01 707 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 URGCPQ8TCY9 931 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 HDAC7Q8WUI4 952 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 AUTS2Q8WXX7 1259 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 SLC7A3Q8WY07 619 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 ACSF2Q96CM8 615 aaPredicted RBP9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 ZNF274Q96GC6 653 aaPredicted RBP9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 SMOC2Q9H3U7 446 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 RSAD1Q9HA92 442 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 UBN1Q9NPG3 1134 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 IGSF9Q9P2J2 1179 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 VAV3Q9UKW4 847 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 SSX2IPQ9Y2D8 614 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 COL4A3BPQ9Y5P4 624 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 DOCK8Q8NF50 2099 aa9.46□□□□□ -0.9
APOBEC3F-204ENST00000491387 VPS13AQ96RL7 3174 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 C2orf16Q68DN1 1984 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 REC8O95072 547 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 SOD2P04179 222 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 ALDH2P05091 517 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 NEFLP07196 543 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 P4HBP07237 508 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 GCFC2P16383 781 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 RFC5P40937 340 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 AFF1P51825 1210 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 DSC1Q08554 894 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 SSRP1Q08945 709 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 TDGQ13569 410 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 LETM2Q2VYF4 491 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 CWF19L1Q69YN2 538 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 TMC5Q6UXY8 1006 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 CCDC149Q6ZUS6 474 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 ASCL5Q7RTU5 278 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 KRT25Q7Z3Z0 450 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 IFNLR1Q8IU57 520 aaPredicted RBP9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 KSR1Q8IVT5 923 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 C4orf19Q8IY42 314 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 COLGALT2Q8IYK4 626 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 FEZF2Q8TBJ5 459 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 PRPF31Q8WWY3 499 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 PSPC1Q8WXF1 523 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 NXPE3Q969Y0 559 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 CCDC51Q96ER9 411 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 NLRP4Q96MN2 994 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 RTP3Q9BQQ7 232 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 SH2D3AQ9BRG2 576 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 TM6SF1Q9BZW5 370 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 MINDY3Q9H8M7 445 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 KCNK12Q9HB15 430 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 RXFP1Q9HBX9 757 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 MRPL17Q9NRX2 175 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 PPP4R2Q9NY27 417 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 EPS15L1Q9UBC2 864 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 DDX25Q9UHL0 483 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 DPP7Q9UHL4 492 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 DUSP12Q9UNI6 340 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 INPP5FQ9Y2H2 1132 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 FAN1Q9Y2M0 1017 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 OTOGLQ3ZCN5 2332 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 ANK1P16157 1881 aa9.45□□□□□ -0.9
APOBEC3F-204ENST00000491387 MYO15AQ9UKN7 3530 aa9.44□□□□□ -0.9
APOBEC3F-204ENST00000491387 FAM205CA6NFA0 338 aa9.44□□□□□ -0.9
APOBEC3F-204ENST00000491387 NRP1O14786 923 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms