RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 YDJCA8MPS7 323 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 PHKA2P46019 1235 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 NNTQ13423 1086 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 EMC2Q15006 297 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 CEP85LQ5SZL2 805 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 RNF187Q5TA31 235 aaPredicted RBP7.9□□□□□ -1.14
NPHP3-208ENST00000490993 GLYCTKQ8IVS8 523 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 OTUD5Q96G74 571 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 AKT3Q9Y243 479 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 LAMB2P55268 1798 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 A0A0A6YYK5 440 aaPredicted RBP7.9□□□□□ -1.14
NPHP3-208ENST00000490993 ZEB2O60315 1214 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 PPFIA4O75335 1185 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 HNRNPH3P31942 346 aaKnown RBP7.9□□□□□ -1.14
NPHP3-208ENST00000490993 DR1Q01658 176 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 DMTNQ08495 405 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 C1orf186Q6ZWK4 172 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 RSRC2Q7L4I2 434 aaKnown RBP7.9□□□□□ -1.14
NPHP3-208ENST00000490993 SAAL1Q96ER3 474 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 ARHGAP20Q9P2F6 1191 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 PJA2O43164 708 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 NCK2O43639 380 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 RNF40O75150 1001 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 FTLP02792 175 aaPredicted RBP7.9□□□□□ -1.14
NPHP3-208ENST00000490993 KRT71Q3SY84 523 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 NBPF12Q5TAG4 269 aaPredicted RBP7.9□□□□□ -1.14
NPHP3-208ENST00000490993 ANKRD13AQ8IZ07 590 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 TTC39CQ8N584 583 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 ADARB2Q9NS39 739 aaKnown RBP7.9□□□□□ -1.14
NPHP3-208ENST00000490993 EML1O00423 815 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 EXTL3O43909 919 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 AKAP3O75969 853 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 ECEL1O95672 775 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 FGGP02679 453 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 GARTP22102 1010 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 EIF3BP55884 814 aaKnown RBP7.9□□□□□ -1.15
NPHP3-208ENST00000490993 DNAJC21Q5F1R6 531 aaKnown RBP7.9□□□□□ -1.15
NPHP3-208ENST00000490993 CYFIP1Q7L576 1253 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 EEPD1Q7L9B9 569 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF677Q86XU0 584 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 TMEM139Q8IV31 216 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 GPC2Q8N158 579 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 CYP2W1Q8TAV3 490 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 TMC2Q8TDI7 906 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 ZKSCAN4Q969J2 545 aaPredicted RBP7.9□□□□□ -1.15
NPHP3-208ENST00000490993 DPH5Q9H2P9 285 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 DNAJC18Q9H819 358 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 UVRAGQ9P2Y5 699 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 CNOT8Q9UFF9 292 aaKnown RBP7.9□□□□□ -1.15
NPHP3-208ENST00000490993 FBXL5Q9UKA1 691 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 ZHX1Q9UKY1 873 aaPredicted RBP7.9□□□□□ -1.15
NPHP3-208ENST00000490993 UBIAD1Q9Y5Z9 338 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 LAMA4Q16363 1823 aa7.9□□□□□ -1.15
NPHP3-208ENST00000490993 C4AP0C0L4 1744 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 FAM187AA6NFU0 413 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 MAPK13O15264 365 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ZC3H11AO75152 810 aaKnown RBP eCLIP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ZMYND10O75800 440 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 OATP04181 439 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 CALB1P05937 261 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SRGAP2CP0DJJ0 459 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 HSD17B4P51659 736 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ACTR2P61160 394 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 IGBP1P78318 339 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 TFAMQ00059 246 aaKnown RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ITIH3Q06033 890 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SLMAPQ14BN4 828 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 WDR93Q6P2C0 686 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ZBTB33Q86T24 672 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SPATS2Q86XZ4 545 aaKnown RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SPIRE2Q8WWL2 714 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 HSD17B14Q9BPX1 270 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 CAPS2Q9BXY5 557 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 IFT122Q9HBG6 1241 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 CYP26B1Q9NR63 512 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 RBAKQ9NYW8 714 aaPredicted RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SUCLA2Q9P2R7 463 aaPredicted RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 COL2A1P02458 1487 aaPredicted RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ASAP2O43150 1006 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SART1O43290 800 aaKnown RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SPATA31C1P0DKV0 1188 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ATF2P15336 505 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 GPC3P51654 580 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 GALCP54803 685 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ZRSR2Q15696 482 aaKnown RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 NFIL3Q16649 462 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 PTPROQ16827 1216 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 CPLX4Q7Z7G2 160 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 DHX38Q92620 1227 aaKnown RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SHISA4Q96DD7 197 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SPATA33Q96N06 139 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 FAM204AQ9H8W3 233 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ELP3Q9H9T3 547 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 VAV3Q9UKW4 847 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 MYPNQ86TC9 1320 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SUPT20HL2P0C7V6 817 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 HPDP32754 393 aaPredicted RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SLC1A1P43005 524 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 PTGER2P43116 358 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SGO2Q562F6 1265 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms