RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 STK38Q15208 465 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 NOTUMQ6P988 496 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 LRRC55Q6ZSA7 311 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 MRPL10Q7Z7H8 261 aaKnown RBP17■□□□□ 0.31
VPS26A-207ENST00000490696 DEPTORQ8TB45 409 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 LPPQ93052 612 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 PRIMPOLQ96LW4 560 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 DRC1Q96MC2 740 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 KIFC3Q9BVG8 833 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 PLVAPQ9BX97 442 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 CCDC113Q9H0I3 377 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 TYW1Q9NV66 732 aaKnown RBP17■□□□□ 0.31
VPS26A-207ENST00000490696 PRMT7Q9NVM4 692 aaPredicted RBP17■□□□□ 0.31
VPS26A-207ENST00000490696 LMCD1Q9NZU5 365 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 KCND2Q9NZV8 630 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 HCSTQ9UBK5 93 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 KIAA1671Q9BY89 1806 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 SPTLC2O15270 562 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 BRD1O95696 1058 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 NPTX2P47972 431 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 NCBP1Q09161 790 aaKnown RBP16.99■□□□□ 0.31
VPS26A-207ENST00000490696 GPM6BQ13491 265 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 ARSHQ5FYA8 562 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 AGMOQ6ZNB7 445 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 ABI1Q8IZP0 508 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 RASSF8Q8NHQ8 419 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 HELQQ8TDG4 1101 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 RAD54LQ92698 747 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 C11orf84Q9BUA3 381 aaPredicted RBP16.99■□□□□ 0.31
VPS26A-207ENST00000490696 EIF2AQ9BY44 585 aaKnown RBP16.99■□□□□ 0.31
VPS26A-207ENST00000490696 CWH43Q9H720 699 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 C17orf75Q9HAS0 396 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 ZDHHC9Q9Y397 364 aa16.99■□□□□ 0.31
VPS26A-207ENST00000490696 MYO7AQ13402 2215 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 CNTNAP2Q9UHC6 1331 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 A0A1B0GUA9 196 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 TTLL13PA6NNM8 815 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 ACKR2O00590 384 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 PPP6R2O75170 966 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 EDN1P05305 212 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 PRKCBP05771 671 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 NCLP19338 710 aaKnown RBP16.98■□□□□ 0.31
VPS26A-207ENST00000490696 EFNA5P52803 228 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 PEX3P56589 373 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 RAD51AP2Q09MP3 1159 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 DMP1Q13316 513 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-207ENST00000490696 BECN1Q14457 450 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 MCM6Q14566 821 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 MAPK6Q16659 721 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 FOXD4L6Q3SYB3 417 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-207ENST00000490696 LONRF3Q496Y0 759 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 NAALADL2Q58DX5 795 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 FOXD4L3Q6VB84 417 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-207ENST00000490696 LRRC43Q8N309 656 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 SMG8Q8ND04 991 aaKnown RBP16.98■□□□□ 0.31
VPS26A-207ENST00000490696 RSPH1Q8WYR4 309 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 P2RX5Q93086 422 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 PGBD4Q96DM1 585 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 ARHGAP28Q9P2N2 729 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 IPPQ9Y573 584 aa16.98■□□□□ 0.31
VPS26A-207ENST00000490696 NPHP3-ACAD11A0A0J9YXS1 232 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 CCDC169A6NNP5 214 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 SFI1A8K8P3 1242 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 OFD1O75665 1012 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 DDIT3P35638 169 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 CCDC85BQ15834 202 aaPredicted RBP16.97■□□□□ 0.31
VPS26A-207ENST00000490696 ATL3Q6DD88 541 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 GLB1LQ6UWU2 654 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 GPBP1Q86WP2 473 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 CDR2LQ86X02 465 aaPredicted RBP16.97■□□□□ 0.31
VPS26A-207ENST00000490696 MICALL1Q8N3F8 863 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 PPM1EQ8WY54 764 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 LARP4BQ92615 738 aaKnown RBP16.97■□□□□ 0.31
VPS26A-207ENST00000490696 MRPL38Q96DV4 380 aaKnown RBP16.97■□□□□ 0.31
VPS26A-207ENST00000490696 NTPCRQ9BSD7 190 aaKnown RBP16.97■□□□□ 0.31
VPS26A-207ENST00000490696 CCDC39Q9UFE4 941 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 PLAGL2Q9UPG8 496 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 REV3LO60673 3130 aa16.97■□□□□ 0.31
VPS26A-207ENST00000490696 GRM6O15303 877 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 ITGB1P05556 798 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 PLS3P13797 630 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 LAG3P18627 525 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 TXLNAP40222 546 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 DNM1Q05193 864 aaKnown RBP16.96■□□□□ 0.31
VPS26A-207ENST00000490696 PRPF4BQ13523 1007 aaKnown RBP16.96■□□□□ 0.31
VPS26A-207ENST00000490696 DHX8Q14562 1220 aaKnown RBP16.96■□□□□ 0.31
VPS26A-207ENST00000490696 PTPROQ16827 1216 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 SPOUT1Q5T280 376 aaKnown RBP16.96■□□□□ 0.31
VPS26A-207ENST00000490696 SLC27A1Q6PCB7 646 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 TAS1R3Q7RTX0 852 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 KLHL23Q8NBE8 558 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 COLGALT1Q8NBJ5 622 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 SPIRE2Q8WWL2 714 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 REEP2Q9BRK0 252 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 MRPL9Q9BYD2 267 aaKnown RBP16.96■□□□□ 0.31
VPS26A-207ENST00000490696 LMAN2LQ9H0V9 348 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 PDZD7Q9H5P4 517 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 TMEM134Q9H6X4 195 aa16.96■□□□□ 0.31
VPS26A-207ENST00000490696 RSAD1Q9HA92 442 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms