RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 DRP2Q13474 957 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 CUL4AQ13619 759 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 TRIM67Q6ZTA4 783 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 VPS52Q8N1B4 723 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 IGSF21Q96ID5 467 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 ZNF668Q96K58 619 aaPredicted RBP11.54□□□□□ -0.56
TTC28-207ENST00000490475 RPGRIP1Q96KN7 1286 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 CCDC43Q96MW1 224 aaKnown RBP11.54□□□□□ -0.56
TTC28-207ENST00000490475 IPO9Q96P70 1041 aaKnown RBP11.54□□□□□ -0.56
TTC28-207ENST00000490475 FAM193BQ96PV7 902 aaPredicted RBP11.54□□□□□ -0.56
TTC28-207ENST00000490475 MTRQ99707 1265 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 TMEM175Q9BSA9 504 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 S1PR5Q9H228 398 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 ADAM7Q9H2U9 754 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 IFT122Q9HBG6 1241 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 PCDHA12Q9UN75 941 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 SMC3Q9UQE7 1217 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 HIDE1A8MVS5 230 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 EML1O00423 815 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 NR1I2O75469 434 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 DGAT1O75907 488 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 LYPLA2O95372 231 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 CXCL14O95715 111 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 ALDH2P05091 517 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 CTSAP10619 480 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 XRCC6P12956 609 aaKnown RBP eCLIP11.53□□□□□ -0.56
TTC28-207ENST00000490475 CA8P35219 290 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 NUBP1P53384 320 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 LAMTOR4Q0VGL1 99 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 EMC2Q15006 297 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 XKR9Q5GH70 373 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 PLA2G4FQ68DD2 849 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 NCAPH2Q6IBW4 605 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 HFE2Q6ZVN8 426 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 MRPL10Q7Z7H8 261 aaKnown RBP11.53□□□□□ -0.56
TTC28-207ENST00000490475 ZBTB33Q86T24 672 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 FERMT3Q86UX7 667 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 PRPF31Q8WWY3 499 aaKnown RBP11.53□□□□□ -0.56
TTC28-207ENST00000490475 HAS1Q92839 578 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 PBXIP1Q96AQ6 731 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 EMILIN2Q9BXX0 1053 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 FOXP1Q9H334 677 aaPredicted RBP11.53□□□□□ -0.56
TTC28-207ENST00000490475 RSAD1Q9HA92 442 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 ANKEF1Q9NU02 776 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 TBC1D13Q9NVG8 400 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 HCSTQ9UBK5 93 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
TTC28-207ENST00000490475 PCDHB2Q9Y5E7 798 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 PCDHGC5Q9Y5F6 944 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 HCFC2Q9Y5Z7 792 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 ZDBF2Q9HCK1 2354 aa11.53□□□□□ -0.56
TTC28-207ENST00000490475 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.52□□□□□ -0.57
TTC28-207ENST00000490475 TMEM150BA6NC51 233 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 TMEM221A6NGB7 291 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 M0R296 226 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 CSDE1O75534 798 aaKnown RBP11.52□□□□□ -0.57
TTC28-207ENST00000490475 OFD1O75665 1012 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 GALTP07902 379 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 SRGAP2CP0DJJ0 459 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 NCLP19338 710 aaKnown RBP11.52□□□□□ -0.57
TTC28-207ENST00000490475 NPEPPSP55786 919 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 GNL2Q13823 731 aaKnown RBP11.52□□□□□ -0.57
TTC28-207ENST00000490475 CALCRLQ16602 461 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 PTPN21Q16825 1174 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 ATAT1Q5SQI0 421 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 LARP1BQ659C4 914 aaKnown RBP11.52□□□□□ -0.57
TTC28-207ENST00000490475 LLGL2Q6P1M3 1020 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 NOTUMQ6P988 496 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 SYCE2Q6PIF2 218 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 POTEDQ86YR6 584 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 NOSTRINQ8IVI9 506 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 TPH2Q8IWU9 490 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 UBALD2Q8IYN6 164 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 RNF149Q8NC42 400 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 VN1R2Q8NFZ6 395 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 SH2D3AQ9BRG2 576 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 NFKBIZQ9BYH8 718 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 ZBP1Q9H171 429 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 NRDE2Q9H7Z3 1164 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 USTQ9Y2C2 406 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 INPP5FQ9Y2H2 1132 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 KIF3AQ9Y496 699 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 ZMYM2Q9UBW7 1377 aa11.52□□□□□ -0.57
TTC28-207ENST00000490475 TRIOO75962 3097 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 K7ELQ4 463 aaPredicted RBP11.51□□□□□ -0.57
TTC28-207ENST00000490475 NEMFO60524 1076 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 CLASP2O75122 1294 aaKnown RBP11.51□□□□□ -0.57
TTC28-207ENST00000490475 C1RP00736 705 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 ITGA4P13612 1032 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 U2AF2P26368 475 aaKnown RBP eCLIP11.51□□□□□ -0.57
TTC28-207ENST00000490475 PBX3P40426 434 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 SPIRE1Q08AE8 756 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 ORC2Q13416 577 aaPredicted RBP11.51□□□□□ -0.57
TTC28-207ENST00000490475 ZNF174Q15697 407 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 MCTP1Q6DN14 999 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 CYP26C1Q6V0L0 522 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 IFNLR1Q8IU57 520 aaPredicted RBP11.51□□□□□ -0.57
TTC28-207ENST00000490475 KSR1Q8IVT5 923 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms