RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 CCDC51Q96ER9 411 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 ZNF274Q96GC6 653 aaPredicted RBP13.17□□□□□ -0.3
FDPS-215ENST00000490140 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 CCDC43Q96MW1 224 aaKnown RBP13.17□□□□□ -0.3
FDPS-215ENST00000490140 MBOAT7Q96N66 472 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 FAM86C1Q9NVL1 165 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 FAN1Q9Y2M0 1017 aa13.17□□□□□ -0.3
FDPS-215ENST00000490140 TBX3O15119 743 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 OFD1O75665 1012 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
FDPS-215ENST00000490140 ALDH2P05091 517 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 P4HBP07237 508 aaKnown RBP13.16□□□□□ -0.3
FDPS-215ENST00000490140 RFX1P22670 979 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 AXLP30530 894 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 SLC11A1P49279 550 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 LETM2Q2VYF4 491 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 ANO5Q75V66 913 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 GPR149Q86SP6 731 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 TMEM173Q86WV6 379 aaPredicted RBP13.16□□□□□ -0.3
FDPS-215ENST00000490140 SLFN12Q8IYM2 578 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 AUTS2Q8WXX7 1259 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 SNX27Q96L92 541 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 CEP89Q96ST8 783 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 RTP3Q9BQQ7 232 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 IGSF9Q9P2J2 1179 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 LIMD1Q9UGP4 676 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 FBXL21Q9UKT6 434 aa13.16□□□□□ -0.3
FDPS-215ENST00000490140 MYO15AQ9UKN7 3530 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 SPTBN4Q9H254 2564 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 TMEM150BA6NC51 233 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 SOD2P04179 222 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 ASGR2P07307 311 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 WEE2P0C1S8 567 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 NBL1P41271 181 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 CLCN4P51793 760 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 CREMQ03060 361 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 TDGQ13569 410 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 TFDP1Q14186 410 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 MXD4Q14582 209 aaPredicted RBP13.15□□□□□ -0.3
FDPS-215ENST00000490140 INF2Q27J81 1249 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 LONRF3Q496Y0 759 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 PLA2G4FQ68DD2 849 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 PPP4R3AQ6IN85 833 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 NOTUMQ6P988 496 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
FDPS-215ENST00000490140 C12orf76Q8N812 135 aaPredicted RBP13.15□□□□□ -0.3
FDPS-215ENST00000490140 CMASQ8NFW8 434 aaPredicted RBP13.15□□□□□ -0.3
FDPS-215ENST00000490140 PRPF31Q8WWY3 499 aaKnown RBP13.15□□□□□ -0.3
FDPS-215ENST00000490140 GJA10Q969M2 543 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 SH2D3AQ9BRG2 576 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 LXNQ9BS40 222 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 TRIM6Q9C030 488 aaPredicted RBP13.15□□□□□ -0.3
FDPS-215ENST00000490140 DHX33Q9H6R0 707 aaKnown RBP13.15□□□□□ -0.3
FDPS-215ENST00000490140 IFT122Q9HBG6 1241 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 ZSWIM6Q9HCJ5 1215 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 BRMS1Q9HCU9 246 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 KCNMB3Q9NPA1 279 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 CDH22Q9UJ99 828 aa13.15□□□□□ -0.3
FDPS-215ENST00000490140 STBD1O95210 358 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
FDPS-215ENST00000490140 GLUD1P00367 558 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 C1RP00736 705 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 SSBP05455 408 aaKnown RBP eCLIP13.14□□□□□ -0.31
FDPS-215ENST00000490140 SRGAP2CP0DJJ0 459 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 ITGA4P13612 1032 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
FDPS-215ENST00000490140 YWHABP31946 246 aaKnown RBP13.14□□□□□ -0.31
FDPS-215ENST00000490140 GLUD2P49448 558 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 LAMTOR4Q0VGL1 99 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 EMC2Q15006 297 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 KSR1Q8IVT5 923 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 C4orf19Q8IY42 314 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 TMEM105Q8N8V8 129 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 RNF149Q8NC42 400 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 FLCNQ8NFG4 579 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 HDAC7Q8WUI4 952 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 WASF1Q92558 559 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 NKD2Q969F2 451 aaPredicted RBP13.14□□□□□ -0.31
FDPS-215ENST00000490140 NXPE3Q969Y0 559 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 KLHL5Q96PQ7 755 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 MTRQ99707 1265 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 RHOBTB2Q9BYZ6 727 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 TM6SF1Q9BZW5 370 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 ZSWIM4Q9H7M6 989 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 DUSP12Q9UNI6 340 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 VPS13AQ96RL7 3174 aa13.14□□□□□ -0.31
FDPS-215ENST00000490140 STK36Q9NRP7 1315 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 ZMYM2Q9UBW7 1377 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 M0R2N6 131 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 SLC37A4O43826 429 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 EDIL3O43854 480 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 CCNT1O60563 726 aaKnown RBP13.13□□□□□ -0.31
FDPS-215ENST00000490140 CNPP09543 421 aaKnown RBP13.13□□□□□ -0.31
FDPS-215ENST00000490140 AOC1P19801 751 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 AK2P54819 239 aa13.13□□□□□ -0.31
FDPS-215ENST00000490140 TOB2Q14106 344 aaPredicted RBP13.13□□□□□ -0.31
FDPS-215ENST00000490140 EPHA7Q15375 998 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms