RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 WDR6Q9NNW5 1121 aaKnown RBP15.67■□□□□ 0.1
VARS-227ENST00000489979 AGPAT5Q9NUQ2 364 aa15.67■□□□□ 0.1
VARS-227ENST00000489979 WNT16Q9UBV4 365 aa15.67■□□□□ 0.1
VARS-227ENST00000489979 DMXL1Q9Y485 3027 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 CCDC195A0A1B0GUA6 201 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 POMCP01189 267 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 LMNAP02545 664 aaKnown RBP15.66■□□□□ 0.1
VARS-227ENST00000489979 SOD2P04179 222 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 URODP06132 367 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 HMGB1P09429 215 aaKnown RBP15.66■□□□□ 0.1
VARS-227ENST00000489979 MYBP10242 640 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 RFX1P22670 979 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 AK2P54819 239 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 Q4G0T1 1027 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 PLA2G4FQ68DD2 849 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 B3GNT9Q6UX72 402 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 TAS1R1Q7RTX1 841 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 MRPL10Q7Z7H8 261 aaKnown RBP15.66■□□□□ 0.1
VARS-227ENST00000489979 TBCKQ8TEA7 893 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 RIN2Q8WYP3 895 aaPredicted RBP15.66■□□□□ 0.1
VARS-227ENST00000489979 BRF1Q92994 677 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 SLC26A6Q9BXS9 759 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 IFT122Q9HBG6 1241 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 KANSL3Q9P2N6 904 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 CA14Q9ULX7 337 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 R4GN57 208 aa15.66■□□□□ 0.1
VARS-227ENST00000489979 NID2Q14112 1375 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 INPPL1O15357 1258 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 TEX28O15482 410 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 NONOQ15233 471 aaKnown RBP eCLIP15.65■□□□□ 0.1
VARS-227ENST00000489979 NTRK3Q16288 839 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 ANO5Q75V66 913 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 SLC44A3Q8N4M1 653 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 STAMQ92783 540 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 RMDN1Q96DB5 314 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 RPS6KC1Q96S38 1066 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 MYADMQ96S97 322 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 JPH2Q9BR39 696 aaPredicted RBP15.65■□□□□ 0.1
VARS-227ENST00000489979 HERC2P3Q9BVR0 1158 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 RNF26Q9BY78 433 aaPredicted RBP15.65■□□□□ 0.1
VARS-227ENST00000489979 SEMA4AQ9H3S1 761 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 MARCH5Q9NX47 278 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 EPS15L1Q9UBC2 864 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 PRG3Q9Y2Y8 225 aaPredicted RBP15.65■□□□□ 0.1
VARS-227ENST00000489979 COL4A3BPQ9Y5P4 624 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 CLUHO75153 1309 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 CNTNAP2Q9UHC6 1331 aa15.65■□□□□ 0.1
VARS-227ENST00000489979 RFPL2O75678 378 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 TDP2O95551 362 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 GLUD1P00367 558 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 ADH1AP07327 375 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 HOXA11P31270 313 aaPredicted RBP15.64■□□□□ 0.09
VARS-227ENST00000489979 NLRP5P59047 1200 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 UBXN11Q5T124 520 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 CYP26C1Q6V0L0 522 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 RHOBTB2Q9BYZ6 727 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 MINDY3Q9H8M7 445 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 TBC1D17Q9HA65 648 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 DPP7Q9UHL4 492 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 SSX2IPQ9Y2D8 614 aa15.64■□□□□ 0.09
VARS-227ENST00000489979 MTCL1Q9Y4B5 1905 aaKnown RBP15.64■□□□□ 0.09
VARS-227ENST00000489979 CYP3A7-CYP3A51PA0A087WV96 503 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 DCNP07585 359 aaKnown RBP15.63■□□□□ 0.09
VARS-227ENST00000489979 SRGAP2CP0DJJ0 459 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 SRFP11831 508 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 CYP3A7P24462 503 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 OR1G1P47890 313 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 NPEPPSP55786 919 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 PSMC5P62195 406 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 SPECC1Q5M775 1068 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 KIAA0319Q5VV43 1072 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 ELMSAN1Q6PJG2 1045 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 KIAA2013Q8IYS2 634 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 ETNPPLQ8TBG4 499 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 SMG7Q92540 1137 aaKnown RBP15.63■□□□□ 0.09
VARS-227ENST00000489979 ZNF707Q96C28 371 aaPredicted RBP15.63■□□□□ 0.09
VARS-227ENST00000489979 JAKMIP1Q96N16 626 aaKnown RBP15.63■□□□□ 0.09
VARS-227ENST00000489979 RXFP1Q9HBX9 757 aa15.63■□□□□ 0.09
VARS-227ENST00000489979 FANCMQ8IYD8 2048 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 CACNA1IQ9P0X4 2223 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 MED19A0JLT2 244 aaPredicted RBP15.62■□□□□ 0.09
VARS-227ENST00000489979 SPATA31D3P0C874 917 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 IFNAR1P17181 557 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 NCLP19338 710 aaKnown RBP15.62■□□□□ 0.09
VARS-227ENST00000489979 GLUD2P49448 558 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 BMP2KLQ5H9B9 411 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 SPATA31D4Q6ZUB0 917 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 DGLUCYQ7Z3D6 616 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 SRGAP1Q7Z6B7 1085 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 COLGALT2Q8IYK4 626 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 RNF168Q8IYW5 571 aaPredicted RBP15.62■□□□□ 0.09
VARS-227ENST00000489979 ZNF579Q8NAF0 562 aaKnown RBP15.62■□□□□ 0.09
VARS-227ENST00000489979 SMG8Q8ND04 991 aaKnown RBP15.62■□□□□ 0.09
VARS-227ENST00000489979 GPR152Q8TDT2 470 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 PRPF31Q8WWY3 499 aaKnown RBP15.62■□□□□ 0.09
VARS-227ENST00000489979 SLC7A3Q8WY07 619 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 NXPE3Q969Y0 559 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 TMEM143Q96AN5 459 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 C22orf23Q9BZE7 217 aa15.62■□□□□ 0.09
VARS-227ENST00000489979 SH3GLB2Q9NR46 395 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms