RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 ADCY7P51828 1080 aa7.47□□□□□ -1.21
VPS26A-206ENST00000489794 SLFN13Q68D06 897 aa7.47□□□□□ -1.21
VPS26A-206ENST00000489794 FEZF2Q8TBJ5 459 aa7.47□□□□□ -1.21
VPS26A-206ENST00000489794 TEKT5Q96M29 485 aa7.47□□□□□ -1.21
VPS26A-206ENST00000489794 TEPSINQ96N21 525 aa7.47□□□□□ -1.21
VPS26A-206ENST00000489794 NUP88Q99567 741 aaPredicted RBP7.47□□□□□ -1.21
VPS26A-206ENST00000489794 XYLT2Q9H1B5 865 aa7.47□□□□□ -1.21
VPS26A-206ENST00000489794 RBM12Q9NTZ6 932 aaKnown RBP7.47□□□□□ -1.21
VPS26A-206ENST00000489794 GIT1Q9Y2X7 761 aa7.47□□□□□ -1.21
VPS26A-206ENST00000489794 C2orf78A6NCI8 922 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 SLC26A4O43511 780 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 PCDHGA12O60330 932 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 NDUFS2O75306 463 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 CNOT4O95628 575 aaKnown RBP7.46□□□□□ -1.22
VPS26A-206ENST00000489794 ADKP55263 362 aaKnown RBP7.46□□□□□ -1.22
VPS26A-206ENST00000489794 BPIFB4P59827 614 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 RNF151Q2KHN1 245 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 UBXN11Q5T124 520 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 KRT40Q6A162 431 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 CPA6Q8N4T0 437 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 GPR156Q8NFN8 814 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 SNX33Q8WV41 574 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 HOOK2Q96ED9 719 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 NEIL1Q96FI4 390 aaPredicted RBP7.46□□□□□ -1.22
VPS26A-206ENST00000489794 LMF1Q96S06 567 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 CSRNP2Q9H175 543 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 NELFAQ9H3P2 528 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 SCOCQ9UIL1 159 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 ANKRD6Q9Y2G4 727 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 PCDHGA9Q9Y5G4 932 aaKnown RBP7.46□□□□□ -1.22
VPS26A-206ENST00000489794 PCDHGA8Q9Y5G5 932 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 PCDHGA7Q9Y5G6 932 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 PCDHGA6Q9Y5G7 932 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 PCDHGA3Q9Y5H0 932 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 PCDHGA2Q9Y5H1 932 aa7.46□□□□□ -1.22
VPS26A-206ENST00000489794 OTOL1A6NHN0 477 aaPredicted RBP7.45□□□□□ -1.22
VPS26A-206ENST00000489794 FAM171A2A8MVW0 826 aa7.45□□□□□ -1.22
VPS26A-206ENST00000489794 ALDH1A2O94788 518 aa7.45□□□□□ -1.22
VPS26A-206ENST00000489794 TOX4O94842 621 aa7.45□□□□□ -1.22
VPS26A-206ENST00000489794 CT47B1P0C2W7 299 aaPredicted RBP7.45□□□□□ -1.22
VPS26A-206ENST00000489794 U2AF1L5P0DN76 240 aaPredicted RBP7.45□□□□□ -1.22
VPS26A-206ENST00000489794 CNR2P34972 360 aa7.45□□□□□ -1.22
VPS26A-206ENST00000489794 WASP42768 502 aa7.45□□□□□ -1.22
VPS26A-206ENST00000489794 MCAMP43121 646 aa7.45□□□□□ -1.22
VPS26A-206ENST00000489794 U2AF1Q01081 240 aaKnown RBP eCLIP7.45□□□□□ -1.22
VPS26A-206ENST00000489794 PIK3C3Q8NEB9 887 aa7.45□□□□□ -1.22
VPS26A-206ENST00000489794 OR14K1Q8NGZ2 314 aa7.45□□□□□ -1.22
VPS26A-206ENST00000489794 RAPGEFL1Q9UHV5 662 aa7.45□□□□□ -1.22
VPS26A-206ENST00000489794 OAZ3Q9UMX2 235 aa7.45□□□□□ -1.22
VPS26A-206ENST00000489794 AKAP10O43572 662 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 PRAMEF4O60810 478 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 ABLIM3O94929 683 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 PLATP00750 562 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 GASTP01350 101 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 CR2P20023 1033 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 CTSSP25774 331 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 RPS19P39019 145 aaKnown RBP7.44□□□□□ -1.22
VPS26A-206ENST00000489794 ATP2C1P98194 919 aaPredicted RBP7.44□□□□□ -1.22
VPS26A-206ENST00000489794 MGAT2Q10469 447 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 TBR1Q16650 682 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 ERICH6BQ5W0A0 696 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 CMTR2Q8IYT2 770 aaKnown RBP7.44□□□□□ -1.22
VPS26A-206ENST00000489794 THEMISQ8N1K5 641 aaPredicted RBP7.44□□□□□ -1.22
VPS26A-206ENST00000489794 MIER2Q8N344 545 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 ANKRD53Q8N9V6 530 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 RIN2Q8WYP3 895 aaPredicted RBP7.44□□□□□ -1.22
VPS26A-206ENST00000489794 KRTAP4-11Q9BYQ6 195 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 CDH19Q9H159 772 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 C12orf65Q9H3J6 166 aaKnown RBP7.44□□□□□ -1.22
VPS26A-206ENST00000489794 THRAP3Q9Y2W1 955 aaKnown RBP7.44□□□□□ -1.22
VPS26A-206ENST00000489794 EID1Q9Y6B2 187 aa7.44□□□□□ -1.22
VPS26A-206ENST00000489794 AKR1B10O60218 316 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 TMEM127O75204 238 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 RFPL1O75677 317 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 ENDOD1O94919 500 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 GYPEP15421 78 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 C5AR1P21730 350 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 ECHS1P30084 290 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 RAB27AP51159 221 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 CCT2P78371 535 aaKnown RBP7.43□□□□□ -1.22
VPS26A-206ENST00000489794 UBE3CQ15386 1083 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 ZDHHC14Q8IZN3 488 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 ZNF480Q8WV37 535 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 CFHR4Q92496 578 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 HSPBAP1Q96EW2 488 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 ZNF180Q9UJW8 692 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 PNMA8BQ9ULN7 279 aaPredicted RBP7.43□□□□□ -1.22
VPS26A-206ENST00000489794 DUSP10Q9Y6W6 482 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 ZNF536O15090 1300 aa7.43□□□□□ -1.22
VPS26A-206ENST00000489794 ZSCAN20P17040 1043 aaPredicted RBP7.42□□□□□ -1.22
VPS26A-206ENST00000489794 AKAP5P24588 427 aa7.42□□□□□ -1.22
VPS26A-206ENST00000489794 CRHR1P34998 444 aa7.42□□□□□ -1.22
VPS26A-206ENST00000489794 DUSP2Q05923 314 aa7.42□□□□□ -1.22
VPS26A-206ENST00000489794 PPP2R5AQ15172 486 aa7.42□□□□□ -1.22
VPS26A-206ENST00000489794 NFE2Q16621 373 aaPredicted RBP7.42□□□□□ -1.22
VPS26A-206ENST00000489794 PDZD4Q76G19 769 aaPredicted RBP7.42□□□□□ -1.22
VPS26A-206ENST00000489794 MIGA2Q7L4E1 593 aa7.42□□□□□ -1.22
VPS26A-206ENST00000489794 CMTM4Q8IZR5 234 aa7.42□□□□□ -1.22
VPS26A-206ENST00000489794 SHCBP1Q8NEM2 672 aa7.42□□□□□ -1.22
VPS26A-206ENST00000489794 SLC2A13Q96QE2 648 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms