RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 ACTRT1Q8TDG2 376 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 TMC2Q8TDI7 906 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 FAM81BQ96LP2 452 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 GPR88Q9GZN0 384 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 GPRC5CQ9NQ84 441 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 RBM12Q9NTZ6 932 aaKnown RBP16.8■□□□□ 0.28
PTK7-216ENST00000489707 DIS3Q9Y2L1 958 aaKnown RBP16.8■□□□□ 0.28
PTK7-216ENST00000489707 SPDYE16A6NNV3 312 aaPredicted RBP16.8■□□□□ 0.28
PTK7-216ENST00000489707 CLSTN1O94985 981 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 MFAP3P55082 362 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 ACTR2P61160 394 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 IRX5P78411 483 aaPredicted RBP16.8■□□□□ 0.28
PTK7-216ENST00000489707 PPP3CAQ08209 521 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 BRDTQ58F21 947 aaPredicted RBP16.8■□□□□ 0.28
PTK7-216ENST00000489707 XKR3Q5GH77 459 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 SWSAP1Q6NVH7 229 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 DAAM2Q86T65 1068 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 RHOT2Q8IXI1 618 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 USP38Q8NB14 1042 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 LNX1Q8TBB1 728 aaPredicted RBP16.8■□□□□ 0.28
PTK7-216ENST00000489707 AENQ8WTP8 325 aaKnown RBP16.8■□□□□ 0.28
PTK7-216ENST00000489707 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTK7-216ENST00000489707 AGPAT1Q99943 283 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 SYT11Q9BT88 431 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 SUGCTQ9HAC7 445 aa16.8■□□□□ 0.28
PTK7-216ENST00000489707 SEPT9Q9UHD8 586 aaPredicted RBP16.8■□□□□ 0.28
PTK7-216ENST00000489707 POLR2AP24928 1970 aaKnown RBP16.8■□□□□ 0.28
PTK7-216ENST00000489707 TMEM150BA6NC51 233 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 ANKRD62A6NC57 917 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 LRRIQ3A6PVS8 624 aaPredicted RBP16.79■□□□□ 0.28
PTK7-216ENST00000489707 KIAA0391O15091 583 aaKnown RBP16.79■□□□□ 0.28
PTK7-216ENST00000489707 GARTP22102 1010 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 ICAM3P32942 547 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 GCLMP48507 274 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 DLG4P78352 724 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 R3HDM1Q15032 1099 aaKnown RBP16.79■□□□□ 0.28
PTK7-216ENST00000489707 PRAMEF18Q5VWM3 479 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 KRT39Q6A163 491 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 GOLGA6L1Q8N7Z2 621 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 EXOC4Q96A65 974 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 TSPYL1Q9H0U9 437 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 KIAA1586Q9HCI6 787 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 CYP26B1Q9NR63 512 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 AMFRQ9UKV5 643 aa16.79■□□□□ 0.28
PTK7-216ENST00000489707 LCTP09848 1927 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 TMCO5BA8MYB1 307 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 CCDC188H7C350 402 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 PGRMC1O00264 195 aaKnown RBP16.78■□□□□ 0.28
PTK7-216ENST00000489707 FOXN3O00409 490 aaPredicted RBP16.78■□□□□ 0.28
PTK7-216ENST00000489707 PRKCEQ02156 737 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 NNTQ13423 1086 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 ABHD15Q6UXT9 468 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 TRMT1LQ7Z2T5 733 aaKnown RBP16.78■□□□□ 0.28
PTK7-216ENST00000489707 MS4A14Q96JA4 679 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 SH2D3AQ9BRG2 576 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 TMEM8AQ9HCN3 771 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 SEPT11Q9NVA2 429 aaKnown RBP16.78■□□□□ 0.28
PTK7-216ENST00000489707 HPCAL4Q9UM19 191 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 CSADQ9Y600 493 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 SSC5DA1L4H1 1573 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 A0A0G2JMZ2 1700 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 TISP43B9A030 160 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 H3BQF6 201 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 ZNF862O60290 1169 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 RGS20O76081 388 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 SUPT20HL2P0C7V6 817 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 DNA2P51530 1060 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 PAK2Q13177 524 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 ANKRD35Q8N283 1001 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 POMGNT1Q8WZA1 660 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 FBXL18Q96ME1 805 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 TMEM117Q9H0C3 514 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 PSD3Q9NYI0 1048 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 DMGDHQ9UI17 866 aaKnown RBP16.78■□□□□ 0.28
PTK7-216ENST00000489707 COQ4Q9Y3A0 265 aa16.78■□□□□ 0.28
PTK7-216ENST00000489707 HNRNPDLO14979 420 aaKnown RBP16.77■□□□□ 0.28
PTK7-216ENST00000489707 LRRN2O75325 713 aa16.77■□□□□ 0.28
PTK7-216ENST00000489707 ZMYND10O75800 440 aa16.77■□□□□ 0.28
PTK7-216ENST00000489707 HADHBP55084 474 aaKnown RBP16.77■□□□□ 0.28
PTK7-216ENST00000489707 EIF1ADQ8N9N8 165 aaKnown RBP16.77■□□□□ 0.28
PTK7-216ENST00000489707 SLC35G2Q8TBE7 412 aa16.77■□□□□ 0.28
PTK7-216ENST00000489707 PARD3BQ8TEW8 1205 aa16.77■□□□□ 0.28
PTK7-216ENST00000489707 IPO4Q8TEX9 1081 aaKnown RBP16.77■□□□□ 0.28
PTK7-216ENST00000489707 CAVIN3Q969G5 261 aa16.77■□□□□ 0.28
PTK7-216ENST00000489707 BICD1Q96G01 975 aa16.77■□□□□ 0.28
PTK7-216ENST00000489707 MFSD14AQ96MC6 490 aa16.77■□□□□ 0.28
PTK7-216ENST00000489707 NAP1L3Q99457 506 aaPredicted RBP16.77■□□□□ 0.28
PTK7-216ENST00000489707 MPHOSPH6Q99547 160 aaKnown RBP16.77■□□□□ 0.28
PTK7-216ENST00000489707 PDLIM7Q9NR12 457 aa16.77■□□□□ 0.28
PTK7-216ENST00000489707 EHD2Q9NZN4 543 aa16.77■□□□□ 0.28
PTK7-216ENST00000489707 PACSIN2Q9UNF0 486 aaPredicted RBP16.77■□□□□ 0.28
PTK7-216ENST00000489707 CEP104O60308 925 aa16.76■□□□□ 0.27
PTK7-216ENST00000489707 STBD1O95210 358 aa16.76■□□□□ 0.27
PTK7-216ENST00000489707 GPC3P51654 580 aa16.76■□□□□ 0.27
PTK7-216ENST00000489707 STRN3Q13033 797 aa16.76■□□□□ 0.27
PTK7-216ENST00000489707 TCEAL1Q15170 157 aa16.76■□□□□ 0.27
PTK7-216ENST00000489707 C1orf220Q5T0J3 134 aa16.76■□□□□ 0.27
PTK7-216ENST00000489707 ENOSF1Q7L5Y1 443 aa16.76■□□□□ 0.27
PTK7-216ENST00000489707 GPD1LQ8N335 351 aa16.76■□□□□ 0.27
PTK7-216ENST00000489707 KCNN1Q92952 543 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms