RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 PRKCBP05771 671 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 MBTD1Q05BQ5 628 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 STRN3Q13033 797 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 STK38Q15208 465 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 PDE12Q6L8Q7 609 aaKnown RBP12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 KCNT2Q6UVM3 1135 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 POF1BQ8WVV4 589 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 LPPQ93052 612 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 TMEM169Q96HH4 297 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 ASB2Q96Q27 587 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 RPS6KC1Q96S38 1066 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 CSRNP2Q9H175 543 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 IGFLR1Q9H665 355 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 MINDY3Q9H8M7 445 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 C17orf75Q9HAS0 396 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 RC3H2Q9HBD1 1191 aaKnown RBP12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 KMT5AQ9NQR1 393 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 TLR9Q9NR96 1032 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 KCND2Q9NZV8 630 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 PARP2Q9UGN5 583 aa12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 RBM19Q9Y4C8 960 aaKnown RBP12.37□□□□□ -0.43
ARHGEF39-204ENST00000488918 GRM6O15303 877 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 ZNF623O75123 536 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 NPTXRO95502 500 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 ITGB1P05556 798 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 BECN1Q14457 450 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 TCEAL5Q5H9L2 206 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 CLLU1OSQ5K130 101 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 TMC7Q7Z402 723 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 CRIPAKQ8N1N5 446 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 TCHPQ9BT92 498 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 ZHX3Q9H4I2 956 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 CLDND1Q9NY35 253 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 STK39Q9UEW8 545 aa12.36□□□□□ -0.43
ARHGEF39-204ENST00000488918 COL4A6Q14031 1691 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 SIP14410 1827 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 SZT2Q5T011 3432 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 HIP1RO75146 1068 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 TBCAO75347 108 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 ALDH2P05091 517 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 PLA2G4BP0C869 781 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 ARF4P18085 180 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 NCLP19338 710 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 KCNA5P22460 613 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 MARCKSP29966 332 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 MATR3P43243 847 aaKnown RBP eCLIP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 NDUFV1P49821 464 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 PEX3P56589 373 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 RAD51AP2Q09MP3 1159 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 IL17AQ16552 155 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 ECM1Q16610 540 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 PUS10Q3MIT2 529 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 FOXD4L5Q5VV16 416 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 ZNF598Q86UK7 904 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 SPPL3Q8TCT6 385 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 FOXD4L4Q8WXT5 416 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 BICD1Q96G01 975 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 TLE6Q9H808 572 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 NGRNQ9NPE2 291 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 PRDM6Q9NQX0 595 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 LARSQ9P2J5 1176 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 LZTS1Q9Y250 596 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 IPPQ9Y573 584 aa12.35□□□□□ -0.43
ARHGEF39-204ENST00000488918 TTC3P53804 2025 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 ACKR2O00590 384 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 FAM13AO94988 1023 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 HOXA11P31270 313 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 YARSP54577 528 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 BCAR1P56945 870 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 DCAF4L1Q3SXM0 396 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 RRAGBQ5VZM2 374 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 CDCA2Q69YH5 1023 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 RINT1Q6NUQ1 792 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 MRPL10Q7Z7H8 261 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 RBM23Q86U06 439 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 GPBP1Q86WP2 473 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 KRI1Q8N9T8 703 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 MRPS27Q92552 414 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 TCF25Q9BQ70 676 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 CWH43Q9H720 699 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 UBE2ZQ9H832 354 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 TBC1D13Q9NVG8 400 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 MTMR6Q9Y217 621 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 FAN1Q9Y2M0 1017 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 GIT1Q9Y2X7 761 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 CLIC4Q9Y696 253 aa12.34□□□□□ -0.43
ARHGEF39-204ENST00000488918 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
ARHGEF39-204ENST00000488918 B4GALT5O43286 388 aa12.33□□□□□ -0.44
ARHGEF39-204ENST00000488918 OFD1O75665 1012 aa12.33□□□□□ -0.44
ARHGEF39-204ENST00000488918 POMCP01189 267 aa12.33□□□□□ -0.44
ARHGEF39-204ENST00000488918 GUCY2CP25092 1073 aa12.33□□□□□ -0.44
ARHGEF39-204ENST00000488918 ABCD1P33897 745 aa12.33□□□□□ -0.44
ARHGEF39-204ENST00000488918 MLH1P40692 756 aa12.33□□□□□ -0.44
ARHGEF39-204ENST00000488918 OR1G1P47890 313 aa12.33□□□□□ -0.44
ARHGEF39-204ENST00000488918 NPTX2P47972 431 aa12.33□□□□□ -0.44
ARHGEF39-204ENST00000488918 NRIP1P48552 1158 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms