RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 UBA7P41226 1012 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 AFF1P51825 1210 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 NCBP1Q09161 790 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 COL19A1Q14993 1142 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 PPP2R5AQ15172 486 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 SKIV2LQ15477 1246 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 TIGD5Q53EQ6 642 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 TCEAL5Q5H9L2 206 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 NOMO2Q5JPE7 1267 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 SPOUT1Q5T280 376 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 KCNT2Q6UVM3 1135 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 GLB1LQ6UWU2 654 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 USP49Q70CQ1 688 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 POF1BQ8WVV4 589 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 RSPH1Q8WYR4 309 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 PGBD4Q96DM1 585 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 PRIMPOLQ96LW4 560 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 CCSER1Q9C0I3 900 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 C2orf40Q9H1Z8 148 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 BLOC1S4Q9NUP1 217 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 PRMT7Q9NVM4 692 aaPredicted RBP17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 USP20Q9Y2K6 914 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 IPPQ9Y573 584 aa17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 SRPRBQ9Y5M8 271 aaKnown RBP17.63■□□□□ 0.41
CTDSP1-209ENST00000488627 COL4A4P53420 1690 aaPredicted RBP17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 MYO7AQ13402 2215 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 EDN1P05305 212 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 PLA2G4BP0C869 781 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 IRS1P35568 1242 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 PBX3P40426 434 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 NPTX2P47972 431 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 TFF2Q03403 129 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 CEBPZQ03701 1054 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 SLC39A14Q15043 492 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 CSPP1Q1MSJ5 1256 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 ARSHQ5FYA8 562 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 CDR2LQ86X02 465 aaPredicted RBP17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 ZBTB8OSQ8IWT0 167 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 CNNM3Q8NE01 707 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 DEPTORQ8TB45 409 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 HLA-CQ95604 372 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 EPSTI1Q96J88 318 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 IFT74Q96LB3 600 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 ASB2Q96Q27 587 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 NSUN3Q9H649 340 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 TBC1D13Q9NVG8 400 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 COG5Q9UP83 839 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 HES2Q9Y543 173 aa17.62■□□□□ 0.41
CTDSP1-209ENST00000488627 XIRP2A4UGR9 3374 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 VCANP13611 3396 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 SFI1A8K8P3 1242 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 ACKR2O00590 384 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 INPPL1O15357 1258 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 B4GALT3O60512 393 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 NASPP49321 788 aaPredicted RBP17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 PEX3P56589 373 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 MRPS5P82675 430 aaKnown RBP17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 PLCB3Q01970 1234 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 UBE3AQ05086 875 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 KARSQ15046 597 aaKnown RBP17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 MAPK6Q16659 721 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 SPECC1Q5M775 1068 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 CDK5RAP3Q96JB5 506 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 ZNF558Q96NG5 402 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 CLIC6Q96NY7 704 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 NTPCRQ9BSD7 190 aaKnown RBP17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 TIPINQ9BVW5 301 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 MRPL9Q9BYD2 267 aaKnown RBP17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 NRDE2Q9H7Z3 1164 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 RSAD1Q9HA92 442 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 INPP5FQ9Y2H2 1132 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 CNTNAP2Q9UHC6 1331 aa17.61■□□□□ 0.41
CTDSP1-209ENST00000488627 PRKCBP05771 671 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 ITGA4P13612 1032 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 PDIA4P13667 645 aaKnown RBP17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 PLCG1P19174 1290 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 EFNA5P52803 228 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 BCAR1P56945 870 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 ERVFC1P60507 584 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 PKP1Q13835 747 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 NT5DC1Q5TFE4 455 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 SLC27A1Q6PCB7 646 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 TAS1R3Q7RTX0 852 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 ZNF280BQ86YH2 543 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 THNSL1Q8IYQ7 743 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 SLC39A11Q8N1S5 342 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 CALML4Q96GE6 196 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 NXF3Q9H4D5 531 aaKnown RBP17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 PDZD7Q9H5P4 517 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 C17orf75Q9HAS0 396 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 ARHGAP28Q9P2N2 729 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 LZTS1Q9Y250 596 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 PCDHGC5Q9Y5F6 944 aa17.6■□□□□ 0.41
CTDSP1-209ENST00000488627 FNDC1Q4ZHG4 1894 aaPredicted RBP17.59■□□□□ 0.41
CTDSP1-209ENST00000488627 NPHP3-ACAD11A0A0J9YXS1 232 aa17.59■□□□□ 0.41
CTDSP1-209ENST00000488627 FSCN2O14926 492 aa17.59■□□□□ 0.41
CTDSP1-209ENST00000488627 DDHD2O94830 711 aa17.59■□□□□ 0.41
CTDSP1-209ENST00000488627 CSPG5O95196 566 aa17.59■□□□□ 0.41
CTDSP1-209ENST00000488627 NPTXRO95502 500 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms