RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 POU5F1BQ06416 359 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 CUL4BQ13620 913 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 MFSD5Q6N075 450 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 CNNM4Q6P4Q7 775 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 SRGAP1Q7Z6B7 1085 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 ELOA2Q8IYF1 753 aaPredicted RBP11.36□□□□□ -0.59
SKA1-204ENST00000488454 SLC17A8Q8NDX2 589 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 OSMRQ99650 979 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 FDXACB1Q9BRP7 624 aaPredicted RBP11.36□□□□□ -0.59
SKA1-204ENST00000488454 BLZF1Q9H2G9 400 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 ADAMTS10Q9H324 1103 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 KMT5AQ9NQR1 393 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 SEL1LQ9UBV2 794 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 SQORQ9Y6N5 450 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 KAT6AQ92794 2004 aa11.36□□□□□ -0.59
SKA1-204ENST00000488454 PVALEFA0A1B0GWK0 134 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 INO80B-WBP1J3KQ70 363 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 K7ERI5 159 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 GPR182O15218 404 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 TRAK2O60296 914 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 RPS6KA5O75582 802 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 DARSP14868 501 aaKnown RBP11.35□□□□□ -0.59
SKA1-204ENST00000488454 SCP2P22307 547 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 ABCD1P33897 745 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 NPTX2P47972 431 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 EFNA5P52803 228 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 PTENP60484 403 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 MGAT3Q09327 533 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 NFX1Q12986 1120 aaKnown RBP11.35□□□□□ -0.59
SKA1-204ENST00000488454 PPIGQ13427 754 aaKnown RBP eCLIP11.35□□□□□ -0.59
SKA1-204ENST00000488454 CAPSQ13938 189 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 POSTNQ15063 836 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 UNC13DQ70J99 1090 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 FAM178BQ8IXR5 827 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 DAW1Q8N136 415 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 BADQ92934 168 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 DNAJC19Q96DA6 116 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 SCLYQ96I15 445 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 NTPCRQ9BSD7 190 aaKnown RBP11.35□□□□□ -0.59
SKA1-204ENST00000488454 NFKBIZQ9BYH8 718 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 MRPL44Q9H9J2 332 aaKnown RBP11.35□□□□□ -0.59
SKA1-204ENST00000488454 UMODL1Q5DID0 1318 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 PHLPP2Q6ZVD8 1323 aa11.35□□□□□ -0.59
SKA1-204ENST00000488454 SLC16A4O15374 487 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 ZMYND10O75800 440 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 ERLIN2O94905 339 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 RPN1P04843 607 aaKnown RBP11.34□□□□□ -0.59
SKA1-204ENST00000488454 MAPTP10636 758 aaKnown RBP11.34□□□□□ -0.59
SKA1-204ENST00000488454 GHRP10912 638 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 CSF2RAP15509 400 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 SFPQP23246 707 aaKnown RBP eCLIP11.34□□□□□ -0.59
SKA1-204ENST00000488454 CASP1P29466 404 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 ZNF131P52739 623 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 FPGSQ05932 587 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 STRN3Q13033 797 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 MAPK7Q13164 816 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 PAK2Q13177 524 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 PCBP1Q15365 356 aaKnown RBP eCLIP11.34□□□□□ -0.59
SKA1-204ENST00000488454 MAPK6Q16659 721 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 TMEM132AQ24JP5 1023 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 FBXO47Q5MNV8 452 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 TSHZ1Q6ZSZ6 1077 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 FAM43BQ6ZT52 329 aaPredicted RBP11.34□□□□□ -0.59
SKA1-204ENST00000488454 STXBP4Q6ZWJ1 553 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 CATSPER4Q7RTX7 472 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 DEFB128Q7Z7B8 93 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 BSNDQ8WZ55 320 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 SEPT8Q92599 483 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 SMARCE1Q969G3 411 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 WNT8AQ9H1J5 351 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 IFT122Q9HBG6 1241 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 EXOC1Q9NV70 894 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 RMND1Q9NWS8 449 aa11.34□□□□□ -0.59
SKA1-204ENST00000488454 DNAH12Q6ZR08 3092 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 FRMD3A2A2Y4 597 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 K7ENM7 598 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 NBNO60934 754 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 PFKMP08237 780 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 ACTN1P12814 892 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 ZSCAN20P17040 1043 aaPredicted RBP11.33□□□□□ -0.6
SKA1-204ENST00000488454 ITGB8P26012 769 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 CD52P31358 61 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 MDM2Q00987 491 aaPredicted RBP11.33□□□□□ -0.6
SKA1-204ENST00000488454 DPYDQ12882 1025 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 PSMD2Q13200 908 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 PNOCQ13519 176 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 LPIN1Q14693 890 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 CAMK4Q16566 473 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 TRAF7Q6Q0C0 670 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 SFR1Q86XK3 245 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 GPT2Q8TD30 523 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 APBB2Q92870 758 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 GSDMAQ96QA5 445 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 IFIH1Q9BYX4 1025 aaKnown RBP11.33□□□□□ -0.6
SKA1-204ENST00000488454 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
SKA1-204ENST00000488454 PRMT7Q9NVM4 692 aaPredicted RBP11.33□□□□□ -0.6
SKA1-204ENST00000488454 TBC1D7Q9P0N9 293 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 ST3GAL5Q9UNP4 418 aa11.33□□□□□ -0.6
SKA1-204ENST00000488454 NOC2LQ9Y3T9 749 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms