RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 ALDH7A1P49419 539 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 KRT17Q04695 432 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 CAPSQ13938 189 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 SMC1AQ14683 1233 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 AMHR2Q16671 573 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 GLB1LQ6UWU2 654 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 MRPL10Q7Z7H8 261 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 VPS52Q8N1B4 723 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 SMG8Q8ND04 991 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 IGSF21Q96ID5 467 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 CPB2Q96IY4 423 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 MTRQ99707 1265 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 NAP1L4Q99733 375 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 PHF7Q9BWX1 381 aaPredicted RBP12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 MRPL9Q9BYD2 267 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 INO80BQ9C086 356 aaPredicted RBP12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 BRMS1Q9HCU9 246 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 HCN4Q9Y3Q4 1203 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 HES2Q9Y543 173 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 ZDBF2Q9HCK1 2354 aa12.52□□□□□ -0.41
PCYT1A-215ENST00000488235 F8W810 466 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 B4GALT5O43286 388 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 LYPLA2O95372 231 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 BAG4O95429 457 aaKnown RBP12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 CXCL14O95715 111 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 POMCP01189 267 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 WEE2P0C1S8 567 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 SPATA31C1P0DKV0 1188 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 GLRA2P23416 452 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 MCM7P33993 719 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 ARL2P36404 184 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 RARRES1P49788 294 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 PTENP60484 403 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 MBTD1Q05BQ5 628 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 OTUD6AQ7L8S5 288 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 SRGAP1Q7Z6B7 1085 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 CDR2LQ86X02 465 aaPredicted RBP12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 C12orf76Q8N812 135 aaPredicted RBP12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 FAM122AQ96E09 287 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 TMEM169Q96HH4 297 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 GPRC5CQ9NQ84 441 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 PPME1Q9Y570 386 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 CFAP54Q96N23 3096 aa12.51□□□□□ -0.41
PCYT1A-215ENST00000488235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 TTLL13PA6NNM8 815 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 MED24O75448 989 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 CTSAP10619 480 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 SKIP12755 728 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 EPCAMP16422 314 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 CA8P35219 290 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 RAB27AP51159 221 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 RNASELQ05823 741 aaKnown RBP12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 NBR1Q14596 966 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 MAEAQ7L5Y9 396 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 TAS1R1Q7RTX1 841 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 DDX53Q86TM3 631 aaKnown RBP12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 TCP11Q8WWU5 503 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 EDAQ92838 391 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 RSAD1Q9HA92 442 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 ANKEF1Q9NU02 776 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 MARCH5Q9NX47 278 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 MIOSQ9NXC5 875 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 IPPQ9Y573 584 aa12.5□□□□□ -0.41
PCYT1A-215ENST00000488235 GAS2O43903 313 aaKnown RBP12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 USO1O60763 962 aaKnown RBP12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 NCLP19338 710 aaKnown RBP12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 MLH1P40692 756 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 TRIM29Q14134 588 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 PTPN14Q15678 1187 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 ZNF174Q15697 407 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 C8orf34Q49A92 452 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 CATSPER3Q86XQ3 398 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 EXOC8Q8IYI6 725 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 SLC22A17Q8WUG5 538 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 PGBD4Q96DM1 585 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 ZFP42Q96MM3 310 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 GAD1Q99259 594 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 NXF3Q9H4D5 531 aaKnown RBP12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 LIMCH1Q9UPQ0 1083 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 USP20Q9Y2K6 914 aa12.49□□□□□ -0.41
PCYT1A-215ENST00000488235 FSD2A1L4K1 749 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 ARL5CA6NH57 179 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 INO80B-WBP1J3KQ70 363 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 NRP1O14786 923 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 ASAP2O43150 1006 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 LILRB3O75022 631 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 DGAT1O75907 488 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 ERLIN2O94905 339 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 EDN1P05305 212 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 SSBP05455 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 HOXB8P17481 243 aaPredicted RBP12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 ARF4P18085 180 aaPredicted RBP12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 SCNN1GP51170 649 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 ZXDAP98168 799 aa12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 MXD4Q14582 209 aaPredicted RBP12.48□□□□□ -0.41
PCYT1A-215ENST00000488235 ECM1Q16610 540 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms