RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 TRIM14Q14142 442 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 ARID5BQ14865 1188 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 SYCP1Q15431 976 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 HS1BP3Q53T59 392 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 GNASQ5JWF2 1037 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 NFRKBQ6P4R8 1299 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 SLC39A4Q6P5W5 647 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 CXCL17Q6UXB2 119 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 FRMD5Q7Z6J6 570 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 PPFIBP1Q86W92 1011 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 TRIM59Q8IWR1 403 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 C12orf56Q8IXR9 622 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 LINC01465Q8N7H1 131 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 C7orf31Q8N865 590 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 XXYLT1Q8NBI6 393 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 NLRP7Q8WX94 980 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 POMGNT1Q8WZA1 660 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 SAAL1Q96ER3 474 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 MTG1Q9BT17 334 aaPredicted RBP7.56□□□□□ -1.2
PDAP1-203ENST00000488214 MKNK1Q9BUB5 465 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 TARS2Q9BW92 718 aaKnown RBP7.56□□□□□ -1.2
PDAP1-203ENST00000488214 MRPL4Q9BYD3 311 aaKnown RBP7.56□□□□□ -1.2
PDAP1-203ENST00000488214 INO80BQ9C086 356 aaPredicted RBP7.56□□□□□ -1.2
PDAP1-203ENST00000488214 CCDC113Q9H0I3 377 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 NDST4Q9H3R1 872 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 MMRN2Q9H8L6 949 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 METTL14Q9HCE5 456 aaKnown RBP7.56□□□□□ -1.2
PDAP1-203ENST00000488214 DDX20Q9UHI6 824 aaKnown RBP7.56□□□□□ -1.2
PDAP1-203ENST00000488214 KCNG1Q9UIX4 513 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 USP20Q9Y2K6 914 aa7.56□□□□□ -1.2
PDAP1-203ENST00000488214 TANC1Q9C0D5 1861 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 NRCAMQ92823 1304 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 A0A1W2PQC6 194 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 RRN3P2A6NIE6 340 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 K7ERI5 159 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 HAS3O00219 553 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 NRDCO43847 1150 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 KPNA6O60684 536 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 ADAMTS4O75173 837 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 AFPP02771 609 aaKnown RBP7.55□□□□□ -1.2
PDAP1-203ENST00000488214 ADRB2P07550 413 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 TRIM49P0CI25 452 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 TRIM49CP0CI26 452 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 CYP2C9P11712 490 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 TRIM21P19474 475 aaKnown RBP7.55□□□□□ -1.2
PDAP1-203ENST00000488214 MSNP26038 577 aaKnown RBP7.55□□□□□ -1.2
PDAP1-203ENST00000488214 PRMT2P55345 433 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 SNRPFP62306 86 aaKnown RBP7.55□□□□□ -1.2
PDAP1-203ENST00000488214 MYL7Q01449 175 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 MAP2K1Q02750 393 aaPredicted RBP7.55□□□□□ -1.2
PDAP1-203ENST00000488214 MBTD1Q05BQ5 628 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 PPP2R3AQ06190 1150 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 TMEM62Q0P6H9 643 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 SNRNP35Q16560 246 aaKnown RBP7.55□□□□□ -1.2
PDAP1-203ENST00000488214 MAPK6Q16659 721 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 FAM47CQ5HY64 1035 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 MARCH8Q5T0T0 291 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 MAP3K21Q5TCX8 1036 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 RUFY4Q6ZNE9 571 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 CBWD2Q8IUF1 395 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 SLC9A9Q8IVB4 645 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 GPD1LQ8N335 351 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 CCDC155Q8N6L0 562 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 RDH13Q8NBN7 331 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 ZSWIM2Q8NEG5 633 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 PXYLP1Q8TE99 480 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 CACTINQ8WUQ7 758 aaKnown RBP7.55□□□□□ -1.2
PDAP1-203ENST00000488214 CPLX3Q8WVH0 158 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 NTPCRQ9BSD7 190 aaKnown RBP7.55□□□□□ -1.2
PDAP1-203ENST00000488214 MSTO1Q9BUK6 570 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 LSM14BQ9BX40 385 aaKnown RBP7.55□□□□□ -1.2
PDAP1-203ENST00000488214 TMEM134Q9H6X4 195 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 GINS2Q9Y248 185 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 ZKSCAN5Q9Y2L8 839 aa7.55□□□□□ -1.2
PDAP1-203ENST00000488214 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.55□□□□□ -1.27e-7■■■■□ 20.4
PDAP1-203ENST00000488214 CNTNAP2Q9UHC6 1331 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 TRIP11Q15643 1979 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 A0A087WZ62 844 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 LRRC10BA6NIK2 292 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 AKR1B15C9JRZ8 316 aaPredicted RBP7.54□□□□□ -1.2
PDAP1-203ENST00000488214 ASAP2O43150 1006 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 B4GALT5O43286 388 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 MFAP3LO75121 409 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 PIGRP01833 764 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 GYPCP04921 128 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 ASGR1P07306 291 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 GARTP22102 1010 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 ADSSP30520 456 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 CASP14P31944 242 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 GRK4P32298 578 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 GPC3P51654 580 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 ADKP55263 362 aaKnown RBP7.54□□□□□ -1.2
PDAP1-203ENST00000488214 PTENP60484 403 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 ZNF200P98182 395 aaPredicted RBP7.54□□□□□ -1.2
PDAP1-203ENST00000488214 RBL2Q08999 1139 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 KCNH2Q12809 1159 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 BFSP1Q12934 665 aa7.54□□□□□ -1.2
PDAP1-203ENST00000488214 TBX2Q13207 712 aaPredicted RBP7.54□□□□□ -1.2
PDAP1-203ENST00000488214 PRPF4BQ13523 1007 aaKnown RBP7.54□□□□□ -1.2
PDAP1-203ENST00000488214 MYBPC2Q14324 1141 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms