RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 MUC3BQ9H195 1237 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 CYP4F11Q9HBI6 524 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 RASA4BC9J798 803 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 RASA4O43374 803 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP33Q8TEY7 942 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 DCAF4Q8WV16 495 aa16.3■□□□□ 0.2
PKD1-220ENST00000487932 USP17L10C9JJH3 530 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 TMEM62Q0P6H9 643 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 SEPT2Q15019 361 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 PDXDC1Q6P996 788 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 FBXO40Q9UH90 709 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 KIF28PB7ZC32 967 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 FAM102AQ5T9C2 384 aaPredicted RBP16.29■□□□□ 0.2
PKD1-220ENST00000487932 ZC3H18Q86VM9 953 aaKnown RBP16.29■□□□□ 0.2
PKD1-220ENST00000487932 STX19Q8N4C7 294 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 NSUN6Q8TEA1 469 aaKnown RBP16.29■□□□□ 0.2
PKD1-220ENST00000487932 DCTN4Q9UJW0 460 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 C5orf58C9J3I9 102 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 PALMO75781 387 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 GRAMD4Q6IC98 578 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 ZNF746Q6NUN9 644 aaPredicted RBP16.29■□□□□ 0.2
PKD1-220ENST00000487932 ALKBH5Q6P6C2 394 aaKnown RBP16.29■□□□□ 0.2
PKD1-220ENST00000487932 RPAINQ86UA6 219 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 PIH1D3Q9NQM4 214 aaKnown RBP16.29■□□□□ 0.2
PKD1-220ENST00000487932 CYP21A2P08686 494 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 SULT1E1P49888 294 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 ARMC6Q6NXE6 501 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 NLRP10Q86W26 655 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 NUP85Q9BW27 656 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 TMEM260Q9NX78 707 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 SEC24DO94855 1032 aaPredicted RBP16.29■□□□□ 0.2
PKD1-220ENST00000487932 STAT3P40763 770 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 SPARCL1Q14515 664 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 NAALADL2Q58DX5 795 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 C1orf146Q5VVC0 180 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 AP1ARQ63HQ0 302 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 TBC1D1Q86TI0 1168 aaPredicted RBP16.29■□□□□ 0.2
PKD1-220ENST00000487932 ARL8AQ96BM9 186 aa16.29■□□□□ 0.2
PKD1-220ENST00000487932 IMPDH2P12268 514 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 VCAM1P19320 739 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 ROR1Q01973 937 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 C6orf118Q5T5N4 469 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 PLEKHM3Q6ZWE6 761 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 EPM2AIP1Q7L775 607 aaPredicted RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 GPT2Q8TD30 523 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 RBM41Q96IZ5 413 aaKnown RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 LSG1Q9H089 658 aaKnown RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 PRPF3O43395 683 aaKnown RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 ZRANB2O95218 330 aaKnown RBP eCLIP16.28■□□□□ 0.2
PKD1-220ENST00000487932 ZNF211Q13398 564 aaPredicted RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 SDE2Q6IQ49 451 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 TRIM33Q9UPN9 1127 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 SKIP12755 728 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 PLAAQ9Y263 795 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 NDUFB5O43674 189 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 ST13P4Q8IZP2 240 aaPredicted RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 CYP26B1Q9NR63 512 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 KRT38O76015 456 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 CCNE1P24864 410 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 ZNF157P51786 506 aaPredicted RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 ARHGEF25Q86VW2 580 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 HS6ST3Q8IZP7 471 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 NSUN7Q8NE18 718 aaKnown RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 APPL2Q8NEU8 664 aa16.28■□□□□ 0.2
PKD1-220ENST00000487932 MRPL4Q9BYD3 311 aaKnown RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 CNOT10Q9H9A5 744 aaKnown RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 ZNF335Q9H4Z2 1342 aaPredicted RBP16.28■□□□□ 0.2
PKD1-220ENST00000487932 CCDC151A5D8V7 595 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 E9PMD0 336 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 CCDC159P0C7I6 412 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 RINLQ6ZS11 566 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 DDX50Q9BQ39 737 aaKnown RBP16.27■□□□□ 0.2
PKD1-220ENST00000487932 OSBPL10Q9BXB5 764 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 EIF4E1BA6NMX2 242 aaKnown RBP16.27■□□□□ 0.2
PKD1-220ENST00000487932 MAN1A2O60476 641 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 TLR2O60603 784 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 TCF3P15923 654 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 KIF23Q02241 960 aaPredicted RBP16.27■□□□□ 0.2
PKD1-220ENST00000487932 TFDP2Q14188 446 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 LMBRD2Q68DH5 695 aaPredicted RBP16.27■□□□□ 0.2
PKD1-220ENST00000487932 IL31Q6EBC2 164 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 APOBEC3FQ8IUX4 373 aaKnown RBP16.27■□□□□ 0.2
PKD1-220ENST00000487932 AGAP3Q96P47 875 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 MAD2L2Q9UI95 211 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 ATP10BO94823 1461 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 WBP4O75554 376 aaKnown RBP16.27■□□□□ 0.2
PKD1-220ENST00000487932 CALB1P05937 261 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 HMOX2P30519 316 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 GPS1Q13098 491 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 MCPH1Q8NEM0 835 aa16.27■□□□□ 0.2
PKD1-220ENST00000487932 GPBP1L1Q9HC44 474 aaPredicted RBP16.27■□□□□ 0.2
PKD1-220ENST00000487932 LSM7Q9UK45 103 aaKnown RBP16.27■□□□□ 0.2
PKD1-220ENST00000487932 CTIFO43310 598 aaKnown RBP16.27■□□□□ 0.19
PKD1-220ENST00000487932 ORC4O43929 436 aa16.27■□□□□ 0.19
PKD1-220ENST00000487932 ARHGAP18Q8N392 663 aa16.27■□□□□ 0.19
PKD1-220ENST00000487932 BHMTQ93088 406 aa16.27■□□□□ 0.19
PKD1-220ENST00000487932 OSBP2Q969R2 916 aa16.27■□□□□ 0.19
PKD1-220ENST00000487932 UNC45AQ9H3U1 944 aa16.27■□□□□ 0.19
PKD1-220ENST00000487932 ZFP69BQ9UJL9 534 aa16.27■□□□□ 0.19
PKD1-220ENST00000487932 WDR62O43379 1518 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms